Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., Type I secretion system ATPase, HlyB from Pseudomonas syringae pv. syringae B728a

 Score =  327 bits (839), Expect = 1e-93
 Identities = 202/699 (28%), Positives = 365/699 (52%), Gaps = 25/699 (3%)

Query: 3   DTLLNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQI 62
           DT L SLV ++R++ +A SPE L +     D  L+      +A + GL AK  R   +++
Sbjct: 18  DTGLASLVMLARFHQVAASPEQLAHEFGSPDQYLSQDSLLLAARKLGLKAKAARTTTERL 77

Query: 63  PHLVFPVVLLLKGGEACVLNSINQE--------TQEAEIVTAESGLVPVAYSLSDLEAMY 114
                P +     G   ++  ++Q         +Q  E+VT E+           L+  +
Sbjct: 78  DRTPLPAIAADNNGGFFIIARLDQGKALIHDPFSQRPEVVTFEA-----------LQERW 126

Query: 115 IGRYFMVKKQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMF 174
            G+  ++    R +  +P      D  WF   I K + +  +V++ S ++ +F++  P+F
Sbjct: 127 TGQLLLI----RSEAGTPGESSSFDFTWFIPAIVKYRKLLGEVMLVSFVLQIFSLITPLF 182

Query: 175 SRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSK 234
            ++V DKV+ +    TL V++ G+  + LF+     LR+Y       + D+ + SKLF  
Sbjct: 183 FQVVMDKVLVHHGLTTLDVIAIGLAGVMLFESALSGLRTYVFAHTASRIDVELGSKLFRH 242

Query: 235 VMGIRMEA-RPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLV 293
           ++ + +   +   VG     ++E E+IR F T   I+ L+D+ F+++F+ +++  +G L 
Sbjct: 243 LITLPLSYFQARRVGDSVARVRELENIRNFLTGNAITLLLDVLFSVVFIAVMFYYSGWLT 302

Query: 294 WVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQY 353
            + ++ + + ++ S LI   L++ + +     ++  A L+E++ G++T+K    + Q   
Sbjct: 303 LIVLLSLPLYILVSVLITPVLRKRLNDSFARGAENQAFLVETVNGIDTLKSMAVEPQAIR 362

Query: 354 RWEEAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAAT 413
           +W+  +A       K++ ++     +   + +   +  +  G  L+ +G L++G LIA  
Sbjct: 363 KWDNQLAGYVAAGFKTQNLSTIANESVSLIGKLVTVATLWFGARLVIDGQLSVGQLIAFN 422

Query: 414 MLSGRAIGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDR 473
           ML+GR   P+++L+ L T + Q   S+  +  +++  +E  +  R    PI +G+IE D+
Sbjct: 423 MLAGRVAQPIMRLAQLWTNFQQTGVSVQRLGDILNTRNELSQVNRSALPPI-KGRIEFDQ 481

Query: 474 VTFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTD 533
           V F Y       +R ++L I PG+ + ++GR GSGK+TL RL+  LY P  G V +D  D
Sbjct: 482 VHFRYRPDGSEILRGINLVITPGQVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGMD 541

Query: 534 ISQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDP 593
           ++      +RR IG V QD++LF  SIR+NI L    +    VM  A  AG   F  + P
Sbjct: 542 LALADVSSLRRQIGVVLQDNMLFNRSIRENIALSDAGAPLEAVMQMAKLAGAHDFILELP 601

Query: 594 AGLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLK 653
            G +  VGE G  LSGGQRQ ++IARA +G P +L+ DE TSA+D  SE  ++Q +  + 
Sbjct: 602 EGYDTMVGEHGASLSGGQRQRIAIARALMGNPRILIFDEATSALDYESERIVQQNMQAIC 661

Query: 654 PSETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692
              T+I+I H+ S +   +R++V+++G I+  G   E+L
Sbjct: 662 KGRTVIIIAHRLSAVRDANRIVVVDRGQIVEQGTHAELL 700