Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  199 bits (506), Expect = 3e-55
 Identities = 168/578 (29%), Positives = 269/578 (46%), Gaps = 52/578 (8%)

Query: 148 YKSKHIYRDVLIA---SLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGIL----- 199
           Y + H  R VL A   S+L  +F +A P+   +  D VV     +  W+   G++     
Sbjct: 11  YSAPH-QRQVLSAIACSILNKIFDLAPPVLIGMAVDVVVQR---QDSWLAKWGVVPVEQQ 66

Query: 200 --VIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPPSVGAFARHLQEF 257
             ++ LF FV   L S F        + L + +  +    ++ E R  + G    HLQE 
Sbjct: 67  LGLLVLFSFVIWSLESLF--------EYLYAWQWRTLAQTLQHELRLDAYG----HLQEL 114

Query: 258 ESIREFFTSATISSLI-----DLPFALLFL-----------VLIWLMAGHLVWVP--VIG 299
           E    FF   +   L+     D+     FL             +  + G + ++   V G
Sbjct: 115 EL--SFFEERSTGQLLSVLNDDINQLERFLDHGANEILQVTTTVLAVGGAMAYLSPTVAG 172

Query: 300 VLILVIYSFL-----IQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYR 354
           + IL I   L      Q RL          A    A L  +L G+ T+K F A+   + R
Sbjct: 173 LAILPIPVILWGSLRFQRRLAPRYARVREQAGLISARLANNLGGIATIKSFTAEAFEKGR 232

Query: 355 WEEAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATM 414
             E        N ++  ++ +      F    A I ++ VG     NG L +G       
Sbjct: 233 VAEDSDAYRQANRRAIALSSAFVPLIRFAILFAFIAILYVGGMETINGRLDVGTYSFLVF 292

Query: 415 LSGRAIGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRV 474
           ++ R + PL  L  +   Y +A +S   +  ++++P +   G++ +    +QG ++ + +
Sbjct: 293 ITQRLLWPLTSLGRVLDDYQRAMASTQRVMDLLAIPVQIPSGRQSLPIGQVQGAVQFEGI 352

Query: 475 TFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDI 534
           TF Y +    SV DL+L I  G+ +AI+G  GSGK+TL +L++  Y+P  G + +D  D+
Sbjct: 353 TFAYRDRE-PSVIDLNLNIPAGQTIAIVGATGSGKSTLVKLLLRFYEPQTGRILLDGIDL 411

Query: 535 SQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPA 594
             L   D+R+ IG V QD  LF+GS+ +NI  G   +   E+  AA  A    F    P 
Sbjct: 412 RDLKLKDLRQAIGFVSQDVFLFHGSVAENIAYGSFDATQTEIEQAAKLAEAHEFIMDLPQ 471

Query: 595 GLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKP 654
           G +  VGE G  LSGGQRQ ++IARA L  PP+L++DE TSA+DN +E  I++ L Q+  
Sbjct: 472 GYDTVVGERGQKLSGGQRQRLAIARAILKDPPILILDEATSAVDNETEAAIQRSLEQITR 531

Query: 655 SETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692
             T + I H+ S +   D + VM++G ++  G   E+L
Sbjct: 532 DRTTLAIAHRLSTIRHADCIYVMDQGRLVEAGHHDELL 569