Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  205 bits (522), Expect = 4e-57
 Identities = 139/446 (31%), Positives = 233/446 (52%), Gaps = 27/446 (6%)

Query: 258 ESIREFFTSATISSLIDLPFALLFLVLI-W-LMAGHLVWVPVIGVLI------LVIYSFL 309
           E + + F  AT  S++ L   L +++ + W L    LV  P++G L+      ++++S  
Sbjct: 136 EVVNKVFHDAT-PSILQLIVVLSYMIYLNWTLTLAILVIAPIMGFLVGWFGQQMLVFSRR 194

Query: 310 IQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKS 369
            QSR+           S   + L E  +G+  V+ F A+     R+            ++
Sbjct: 195 SQSRI-----------SDLSSLLTEVFSGIRLVRAFAAEPYEIERFSREAERNREARYRT 243

Query: 370 RRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLT---MGGLIAATMLSGRAIGPLVQL 426
             +        GF+Q A+ + ++++G + IS G L    +G  +AA  +    I P+V L
Sbjct: 244 AWLRAIQYPVIGFLQAASILFIVVLGSWQISTGQLNGPNLGSYVAAIAM---LIDPIVHL 300

Query: 427 SLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASV 486
                 + Q ++S+  I++++S+    +E  +    P I GK+E  +V+F Y +     +
Sbjct: 301 IDNFNEFKQGQASLDRIDELLSIEPAVQEDPQSRMLPPITGKVEFRQVSFSYRSDSAPVL 360

Query: 487 RDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNI 546
           R L+LT+ PGE VA++G  G+GK+TL  LI   Y P +G + +D   I  +    +RR I
Sbjct: 361 RQLNLTVEPGEAVALVGASGAGKSTLVNLIPRFYDPQDGEILVDGIPIRSVTLGSLRRQI 420

Query: 547 GCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGML 606
           G VPQ+++LF G+I  NI  G+   D   V +AA  A    F  Q P G +  VGE G+ 
Sbjct: 421 GIVPQETILFSGTIAQNIAFGQRQFDRAAVEEAARIANAHQFISQMPDGYDTWVGERGVN 480

Query: 607 LSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTS 666
           LSGGQRQ ++IARA L  P +L++DE TSA+D+ SE  +++ L ++    T+ +I H+ +
Sbjct: 481 LSGGQRQRLAIARAVLLDPRILILDEATSALDSESETLVQEALERVMQGRTVFIIAHRLA 540

Query: 667 MLDVVDRVIVMEKGCIIADGPKHEVL 692
            +    R++VME+G I+  G  H+ L
Sbjct: 541 TVRNASRILVMERGQIVEAG-NHDAL 565