Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., toxin secretion ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  208 bits (530), Expect = 5e-58
 Identities = 144/537 (26%), Positives = 274/537 (51%), Gaps = 23/537 (4%)

Query: 142 WFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVI 201
           WF  T +    +  +++I ++++ L  +  P   + V D+V+P     TL ++   + V 
Sbjct: 12  WFTRTTFFYTPLMIELMIVAIVMRLLGLVQPFVFQAVIDRVLPFQREATLLLIVVVLGVT 71

Query: 202 FLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRM-EARPPSVGAFARHLQEFESI 260
            +   +   L +Y  +  G +  + ++ ++F  V+ + + + +   VG     + E +++
Sbjct: 72  AILSAILDALAAYLGNHMGNRLTLDLAGRIFRHVLHLPLRQLQCWRVGETLTRISEIDTV 131

Query: 261 REFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSF-----LIQSRLK 315
           + F T    S L+DL FA++++  +  ++  L  + +I VL L + +F     L + R++
Sbjct: 132 KAFLTGTVSSILVDLLFAIIYVAALITISPMLTLIVLI-VLPLQVIAFGVIGPLTRRRMQ 190

Query: 316 RAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAH--MANWNIKSRRIT 373
           RA  + SR  S+    L+E+LA + TVK  G +     R    +A   +A + +    I 
Sbjct: 191 RAFLDYSRHQSR----LVETLANVVTVKALGCEAVQSERLNRTLADSLLAGFEVTKLHIV 246

Query: 374 DSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRY 433
           +    T G +   + I ++  G +L+   ++T+G LIA  +L+ +  GP++ LS +  ++
Sbjct: 247 NGF--TGGLLGNVSVISIVFFGSHLVLRNEITLGQLIAFHLLADKVAGPILSLSAVWEQW 304

Query: 434 NQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIEL--DRVTFHY-PNSPIASVRDLS 490
              + +   +  +++   E +  K  +    + G++ L  + V+F Y P  P+  + DL+
Sbjct: 305 QALRIARLRLGDLLNAAAETDISKPPLP---VSGRLSLHLEAVSFCYLPEQPV--ILDLT 359

Query: 491 LTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVP 550
           L I P     I G  G GK+TL +LI G+Y+P  G V  +   ++      +R+ I  +P
Sbjct: 360 LEISPDRPTVITGPSGCGKSTLAKLISGIYRPDCGVVEANGHKLTDYDERSVRQAITYLP 419

Query: 551 QDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGG 610
           Q+  LF GS++DNI LG   + D+E+  A   +G  +F  + P G+   VGE G  LSGG
Sbjct: 420 QEPELFSGSVQDNILLGNAAATDQEIRSALVESGCDLFIGELPNGILTDVGERGAYLSGG 479

Query: 611 QRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSM 667
           QRQ +++ARA +     L++DEPTSA+D+ S   +   + +     T+I++TH   +
Sbjct: 480 QRQRIALARALVSPSRALILDEPTSALDSASADIVIAAIKRHAVKSTVIIVTHNPEL 536