Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  645 bits (1665), Expect = 0.0
 Identities = 331/699 (47%), Positives = 480/699 (68%), Gaps = 9/699 (1%)

Query: 3   DTLLNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQI 62
           D LL+SLV ++ Y+G   S E+L  GLPL+   LTP L P++A RAGL A+  R  LDQI
Sbjct: 23  DPLLDSLVLLTEYFGSPCSSESLAAGLPLSGAILTPDLVPQAAARAGLNARLTRKGLDQI 82

Query: 63  PHLVFPVVLLLKGGEACVLNSINQETQEAEIVTAESG---LVPVAYSLSDLEAMYIGRYF 119
             ++ P +LLLK  +AC+L  +  E  +A I   E+G    +PV      LE +Y+G  F
Sbjct: 83  SPIMMPCILLLKDKKACLLRELTSE--KAVIQLPETGGEETLPV----EQLETLYVGYLF 136

Query: 120 MVKKQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVY 179
           +VK+Q+R D R          HW   T+  +  IYRD LIAS+L+NLFA+ +P+F   VY
Sbjct: 137 LVKQQYRGDMRFDVHHHDNKSHWLLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVY 196

Query: 180 DKVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIR 239
           DKVVPNLAFE+LWVL+ G  + ++FD V + LRSY IDVAGKK DI++SS+LF+K +GI 
Sbjct: 197 DKVVPNLAFESLWVLAIGAGIAYIFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIP 256

Query: 240 MEARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIG 299
           +  R PSVG  A+ L EF+SIR+  TSATI++L+DLPFA+ FL++I+++AG L  +P++G
Sbjct: 257 LSKRSPSVGGMAKQLGEFDSIRDILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPLLG 316

Query: 300 VLILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAV 359
             I++ Y+  IQ +LK AI+E ++ AS K+ +LIESLA LE++K +GA+G  Q  W++ +
Sbjct: 317 GAIIIGYTLYIQPKLKAAIDESNKFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMI 376

Query: 360 AHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRA 419
            H ANW +K++++++S+ N A F+ Q   +G++I+GVY +++  ++MGG+IAA MLS RA
Sbjct: 377 GHTANWQLKAKKLSNSVSNVASFMVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRA 436

Query: 420 IGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYP 479
           + P+ QL+ L TR N   S++  ++Q+M+  DE E     + +  + GKIE D V+F YP
Sbjct: 437 MSPMAQLASLLTRANHTASALRQLDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYP 496

Query: 480 NSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHH 539
            S    +   SL+I PGEKVAIIGR GSGK+TL +L+ GLYKPT+G +R D  D +Q+H 
Sbjct: 497 GSEKPVLHPTSLSIQPGEKVAIIGRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHP 556

Query: 540 IDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQ 599
            D+RRN G +PQD VLF+GSIRDNI  G     + +++ A   +GV++FT  +  GL++Q
Sbjct: 557 SDLRRNFGYLPQDVVLFHGSIRDNILFGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQ 616

Query: 600 VGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLI 659
           VGEGG  LS GQRQ+V++ARA L  PP+LLMDEPT+++D R+E    + +  +    TL+
Sbjct: 617 VGEGGQALSRGQRQTVALARATLNDPPILLMDEPTASLDARAEKQFIRAMEHVSKDRTLV 676

Query: 660 LITHKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQG 698
           +ITHK  +L +VDRVIV+++G ++ADGPK++VL  L  G
Sbjct: 677 IITHKMHLLKLVDRVIVLDRGHVLADGPKNDVLEKLSLG 715