Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

 Score =  190 bits (483), Expect = 2e-52
 Identities = 148/534 (27%), Positives = 258/534 (48%), Gaps = 31/534 (5%)

Query: 166 LFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDI 225
           L+ +A+P+     Y  V   +A  T W    GI        V K+    F+ +     D+
Sbjct: 93  LWLIASPLALTASYGLVRALMAVLTQW--RDGIFAKVAMHAVRKLAYRTFVHM----HDL 146

Query: 226 LISSKLFSKVMGIRMEARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLI 285
            +   L  K  G+        +G         E I        + ++I+L  +L+  VL+
Sbjct: 147 SLRFHLERKTGGLTRVLERGRLG--------IEVIVRMVILQLVPTIIEL--SLVMAVLL 196

Query: 286 WLMAGHLVWVPVIGVLILVIYSFLIQS---RLKRAIEEGSRLASQKYANLIESLAGLETV 342
           W      V   ++ V+  ++Y++        ++R + +    A+QK    I+SL   ETV
Sbjct: 197 WQFDWRYVAAVMVTVVFYMLYTYKATEWRIGIRRRMNDSDSDANQK---AIDSLLNYETV 253

Query: 343 KLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNG 402
           K FGA+ +   R+++++ H  + ++ +      +      +        +++    + NG
Sbjct: 254 KYFGAEEREAKRYDKSMRHYEDASVATYTSLAVLNAGQAVIFTFGLTATMLMCASGVRNG 313

Query: 403 DLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTIIEQ---VMSMPDEQEEGKRY 459
             T+G  +   M++   I     L+ +   Y + K ++  IE+   V+S   E E+    
Sbjct: 314 TNTVGDFV---MINAMMIQLYQPLNFMGMVYREIKQAIIDIEKMFAVLSRKPEVEDRAGA 370

Query: 460 IHRPIIQGKIELDRVTFHY-PNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMG 518
               +  G +  + V F Y P  PI  ++ L+  +  G+ VAI+G  G+GK+T+ RL+  
Sbjct: 371 KPLAVEAGTVRFEDVKFAYDPARPI--LKGLNFEVPAGKTVAIVGPSGAGKSTISRLLFR 428

Query: 519 LYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMD 578
           LY  + G + ID  DI  +    +R  IG VPQD+VLF  +IR NI  GR  + D EV +
Sbjct: 429 LYDVSGGRILIDGQDIRSVTQTSLRAAIGMVPQDTVLFNDTIRYNIRYGRWDATDAEVEE 488

Query: 579 AANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMD 638
           AA  A +  F +  P G + +VGE G+ LSGG++Q V+IAR  L  PP+L++DE TSA+D
Sbjct: 489 AAKTAQIDAFIKASPKGYDTEVGERGLKLSGGEKQRVAIARTVLKAPPILVLDEATSALD 548

Query: 639 NRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692
           + +E  I+  L ++  + T ++I H+ S +   D +IV+++G I   G   ++L
Sbjct: 549 SHTEHEIQGALERVAQNRTSLVIAHRLSTIVGADEIIVLDQGRIAERGTHSQLL 602