Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 788 a.a., putative ATP-binding/permease fusion ABC transporter from Phaeobacter inhibens DSM 17395

 Score =  354 bits (909), Expect = e-102
 Identities = 183/563 (32%), Positives = 334/563 (59%), Gaps = 4/563 (0%)

Query: 141 HWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILV 200
           HWFW    K +    ++++ SL+ N+ AV+  +FS  VYD+VVP+ +  TLWVL+ G  +
Sbjct: 228 HWFWGEFPKYRRQVGEIMLGSLVANILAVSVALFSLQVYDRVVPHQSHATLWVLAVGAFL 287

Query: 201 IFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARP-PSVGAFARHLQEFES 259
             + + + K+ R+   D AG++ ++ + + L  +++G+R + +P P  G FA  +++F S
Sbjct: 288 AIMLEALLKLARARLTDAAGRQIELSVQNNLMRRLIGMRSDKKPLPPSGLFAA-MRDFGS 346

Query: 260 IREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIE 319
           +REFFTS TIS+L D+PF  +FL+L+  +AG +VW+ + G +++++ ++ +Q R+  A+ 
Sbjct: 347 VREFFTSTTISTLADIPFIAVFLLLVASIAGPIVWIIIAGGILMLLPAYFMQKRMI-ALT 405

Query: 320 EGSRLASQKYANLIESLAG-LETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQN 378
             ++ A+ K   L+  +   L+T+K    + +    W+E      +   + RR++ ++ +
Sbjct: 406 RQTQGANAKAGRLLHEVVNELDTLKSQRGEDRVLRLWDELNTLSTHAATEQRRLSSALTH 465

Query: 379 TAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKS 438
            +  VQQA  IG ++VG  ++  G+ T+G +IA  +L+ R + PL Q +    R++  K 
Sbjct: 466 WSQGVQQATYIGSVVVGTLMVFAGEFTVGTIIATGILTSRTLAPLTQFAATLARWSNVKG 525

Query: 439 SMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEK 498
           ++  ++ + +   E+E+ + Y+ R  +QG+ EL  V F Y      ++    + + PG++
Sbjct: 526 ALEGLDAIANSAQEKEDERSYLRRDSLQGRFELREVMFRYDEDGAPTLDVPGVAVTPGQR 585

Query: 499 VAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYG 558
           VA++G  GSGK+TL +L+ GLY P  G V ID TD++Q+   D+RR+IG + QD  LF G
Sbjct: 586 VAVLGVNGSGKSTLLKLMSGLYAPDRGRVMIDGTDMTQIDPRDLRRHIGYLSQDVRLFAG 645

Query: 559 SIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIA 618
           ++R+N+ L +   DD  +M A + AG+    +    GL+ ++ +GG  LS GQRQS+  A
Sbjct: 646 TLRENLNLNQLERDDDRLMTALDFAGLGAHVRNHHKGLDLEIFDGGGGLSIGQRQSIGWA 705

Query: 619 RAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVME 678
           R +L  P ++L+DEPT+A+D   E  +  +L       T ++ TH+  +L + +R ++++
Sbjct: 706 RLWLQNPSIVLLDEPTAALDQTLERTLVSRLETWLEGRTTVIATHRMPILSLTNRTLILQ 765

Query: 679 KGCIIADGPKHEVLNDLRQGNVR 701
            G ++ DGP+ +VL  L  G  +
Sbjct: 766 SGRMVVDGPRDQVLAHLAAGETK 788