Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  210 bits (534), Expect = 2e-58
 Identities = 159/551 (28%), Positives = 274/551 (49%), Gaps = 23/551 (4%)

Query: 158 LIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIF-------LFDFVFKM 210
           ++A+L + + A    +++ ++Y   V +LA E +  L+ G + +        +    F+ 
Sbjct: 39  VVAALAVLILAKLVAVYTPMLYKGAVDSLAGEGVPPLALGAVGLTVAYGMARILTNGFQQ 98

Query: 211 LRSYFIDVAGKKSDILISSKLFSKVMGIRMEAR-PPSVGAFARHLQEFESIREFFTSATI 269
           LR       G+++   ++ + F  +  + M        G  +R ++      EF     +
Sbjct: 99  LRDAVFAPVGQRALRRLALETFRHIHRLSMRYHITRKTGGLSRIIERGVKGVEFLLRFLL 158

Query: 270 SSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLI--LVIYSFLIQS---RLKRAIEEGSRL 324
            S+  L   L  + +I  +   + ++ V+ V I   V ++F I     +L+R + +    
Sbjct: 159 FSIGPLVLELALVAIILAVLFDIWYLVVVAVTIGFYVWFTFAITEWRVKLRREMNKQDTD 218

Query: 325 ASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQ 384
           A+QK    I+SL   ETVK FGA+ +   R++ A+   A   +K+      +      V 
Sbjct: 219 ANQK---AIDSLLNYETVKYFGAEDRETERYDVAMRAYAKAALKTAYSLAFLNFGQSLVI 275

Query: 385 QAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTIIE 444
               + ++++    +  G+LT+G  +   M++   I   V L+ L T Y + + S+  + 
Sbjct: 276 TGGLVAVMVMAAIGVQQGNLTVGDFV---MVNAYMIQITVPLNFLGTVYREIRQSLVDMG 332

Query: 445 QVMSMPDEQEEGKRYIHRPIIQ---GKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAI 501
           ++  + ++  + K   +  ++Q   G I L+ V F Y +S    ++ +S  +  G  VAI
Sbjct: 333 EMFDLIEQDPDVKDRDNAKVLQVNGGAITLENVEFGY-DSDRQILKGVSFEVAAGHTVAI 391

Query: 502 IGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIR 561
           +G  GSGK+T+ RL+   Y  T G +RID  D+  +    +   IG VPQD+VLF  +IR
Sbjct: 392 VGSTGSGKSTIGRLLFRFYDVTRGALRIDGQDVRDVTQKSLHAAIGVVPQDTVLFNDTIR 451

Query: 562 DNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAF 621
            NI  GR  +   EV  AA  A +  F  + P G E QVGE G+ LSGG++Q V IAR  
Sbjct: 452 YNIAYGRAGATQEEVEQAARDAQIHDFIMRLPEGYETQVGERGLKLSGGEKQRVGIARTL 511

Query: 622 LGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVMEKGC 681
           L  PP+LL+DE TSA+D+ +E  IK+ LS+     T+I I H+ S +   D++IV+E+G 
Sbjct: 512 LKNPPILLLDEATSALDSDTEQEIKEALSRAGQGRTVITIAHRLSTVAEADQIIVLEQGE 571

Query: 682 IIADGPKHEVL 692
           I   G   E+L
Sbjct: 572 IAERGTHDELL 582