Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., ABC transporter, ATP-binding/permease protein from Marinobacter adhaerens HP15

 Score =  207 bits (527), Expect = 1e-57
 Identities = 147/570 (25%), Positives = 286/570 (50%), Gaps = 30/570 (5%)

Query: 140 GHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGIL 199
           G W +   ++ + +   VL+  +L  L  VA P+  + + D +  N   + L  +   ++
Sbjct: 22  GLWPYLAEFRGRVVLSLVLL--VLAKLATVATPIALKYIVDYLDQNRGADMLLWIPVILV 79

Query: 200 VIF--------LFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPPSVGAFA 251
           V +        LF+ +   + +   + A ++  + +   L  + +   ++ +    G  A
Sbjct: 80  VAYGTLRFGATLFNELRDAVFARVAERAMRRVSLRVFEHLHQRELAFHLDRK---TGGLA 136

Query: 252 RHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVI--GVLILVIYSFL 309
           R ++   +   F    T+ +++     +L +  I  +  ++ +V  I   V++ V++S  
Sbjct: 137 RDIERGTNGISFLLRFTLFNIVPTLLEILMVAGILFVVFNVGYVLAILVAVVVYVVFSIK 196

Query: 310 IQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWN--- 366
           I     + + E +   +Q  +  I+SL   ETVK F  +   +Y  E     + +W    
Sbjct: 197 ITEWRTKFVREANARDNQSNSRAIDSLLNYETVKYFNNE---RYEAEVYDRDLDDWEQAR 253

Query: 367 IKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQL 426
           +K+R    ++ +    +   A I ++ + V  +++G++T+G     TM++   +   + L
Sbjct: 254 LKNRLSLAALNSGQALIIGLAMIVIMAMAVREVASGEITLGDF---TMINAYLLQLFIPL 310

Query: 427 SLLSTRYNQAKSSMTIIEQVMSMPDEQ---EEGKRYIHRPIIQGKIELDRVTFHY-PNSP 482
           + L   Y + + ++  +E++  +  ++   E+        + +G+++ D + F Y P+ P
Sbjct: 311 NALGFVYREIRQALVNVERLFKLLGDKPAIEDAPDATELAVDRGEVQFDHIHFAYRPDRP 370

Query: 483 IASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDI 542
           I  ++D++ +I  G K+A++G  G+GK+TL RL+   Y   +G +RID  DI Q+    +
Sbjct: 371 I--LKDVNFSIPSGHKIAVVGASGAGKSTLARLLFRFYDVDQGAIRIDGQDIRQVTQDSL 428

Query: 543 RRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGE 602
           R  IG VPQD+VLF  ++  N+  GRP + + EV  AA  A +  F    P G E +VGE
Sbjct: 429 RSAIGVVPQDTVLFNDTLYRNLAYGRPEATEEEVYRAARMAHLEDFIHSLPEGYETKVGE 488

Query: 603 GGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILIT 662
            G+ LSGG++Q V+IAR  L  PP+L++DE TS++D+ SE  I   L ++    T ++I 
Sbjct: 489 RGLKLSGGEKQRVAIARVILKNPPLLILDEATSSLDSLSEQAILTALKEVSQRRTTLVIA 548

Query: 663 HKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692
           H+ S +   D ++VME G I+  G   ++L
Sbjct: 549 HRLSTVMDADSILVMEGGKIVESGHHQDLL 578