Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 776 a.a., ABC transporter, ATP-binding protein/permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  550 bits (1418), Expect = e-161
 Identities = 299/701 (42%), Positives = 447/701 (63%), Gaps = 5/701 (0%)

Query: 5   LLNSLVYVSRYYGLANSPEALINGLPLA--DGKLTPFLFPRSAERAGLIAKENRAP-LDQ 61
           L+  L  + R  G   S   L++GLP+   +G        R+A  AG+ A+    P L Q
Sbjct: 59  LMQCLALLFRLNGKPVSTRYLMSGLPMGATEGPALTAACLRAARVAGMEARVAYKPTLRQ 118

Query: 62  IPHLVFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMV 121
           I  L  P ++LLK  +AC+L  I  E  +AE++  E+G+  V   LS L   Y G     
Sbjct: 119 ISPLTLPCIMLLKDEKACILMRIQGE--QAEVLFPETGMDAVTVPLSRLAEEYAGYAVFG 176

Query: 122 KKQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDK 181
               + D+R+ E+   +   WFW T+     IYR VL+AS+++NL  VA+P+F   VYD+
Sbjct: 177 SPVSKLDKRASEMRLLKVKRWFWDTLLHFLPIYRHVLLASVVVNLLTVASPLFFMNVYDR 236

Query: 182 VVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRME 241
           VVPN A +TLWVL+ GI + ++ DFV + LRSYF+DVAG+ +D++++S+L   +M +R++
Sbjct: 237 VVPNSATDTLWVLAVGIGIAYICDFVLRNLRSYFVDVAGRNADVVLASRLMQHLMAVRLD 296

Query: 242 ARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVL 301
            +P S G+ A +L+EFES+REFF S T+ +L+DLPF +LFL ++ L+ G ++ +P I + 
Sbjct: 297 NKPDSTGSLANNLREFESLREFFGSTTLLALVDLPFLVLFLFIVALIGGEMIALPAIAIP 356

Query: 302 ILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAH 361
           +++    L+Q   +R  E G + A QK A L+E + GLETVK   A+G+ Q+ WE+ V  
Sbjct: 357 VVLGVGMLVQYPFQRVAEAGYKEAMQKNALLVEIINGLETVKASMAEGRLQHAWEKVVGM 416

Query: 362 MANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIG 421
            A  N  S+ + +     +  V Q  ++G+II GVY IS+G LTMGGLIA  MLS RA+ 
Sbjct: 417 SARSNAHSKGLANLSITVSLLVTQLVSVGIIIWGVYKISDGTLTMGGLIACNMLSARAMA 476

Query: 422 PLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNS 481
           PL Q++ +  R  Q++ ++  ++ +M +P E+ E + Y+    ++  +EL+ V+F YP +
Sbjct: 477 PLSQIAAMLARLQQSRMALKSLDILMQLPVERPEDRPYVDFGPLEHSLELESVSFAYPGA 536

Query: 482 PIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHID 541
              ++  +SL I PGEKV +IG++GSGK+TL RL+MGLY+P +G V+    DI Q+   D
Sbjct: 537 ERLALDGVSLRIRPGEKVGVIGKMGSGKSTLGRLMMGLYQPRDGAVKFGGVDIRQMDMAD 596

Query: 542 IRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVG 601
           +R  IG + QD+ LFYG++RDNI +G P +DDR +M AA+ AGVT F +  PAG   QVG
Sbjct: 597 LRGRIGYLSQDNYLFYGTLRDNIAMGVPNADDRMIMRAADVAGVTEFARNHPAGFGLQVG 656

Query: 602 EGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILI 661
           E GM LSGGQRQ+V++ARA L  P VL++DEPTS MD  SE   KQ+L  L   +TL+LI
Sbjct: 657 ERGMALSGGQRQAVALARALLHDPDVLILDEPTSNMDTGSEFAFKQRLRALLGDKTLVLI 716

Query: 662 THKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNVRA 702
           TH+ S++D+VDR++V++ G I+ADGP+  V+  LR   V+A
Sbjct: 717 THRMSVIDLVDRLVVVDGGRIVADGPRDAVIKALRSTGVQA 757