Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., multidrug resistance ABC transporter, ATP-binding and permease components from Caulobacter crescentus NA1000

 Score =  183 bits (464), Expect = 2e-50
 Identities = 157/516 (30%), Positives = 245/516 (47%), Gaps = 46/516 (8%)

Query: 200 VIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPPS-VGAFARHLQEFE 258
           V F F  V  +   ++I +A +  + + +++ F+KV     +    S  GA  R L    
Sbjct: 86  VYFAFAVVRNIAHRFWIPLAARNMEEM-TNESFAKVQAFSSDWHADSFAGATVRKLT--- 141

Query: 259 SIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYS------FLIQS 312
             R  +   +++  + +      +VLI L    LV  P+ G++ LV+ +       +I  
Sbjct: 142 --RAMWGYDSVTDAVTIWLGPGVIVLIGLSIAMLVRQPLAGIISLVVVAAYLTVNLVITE 199

Query: 313 RLKRAIEEGSRLASQKYAN-LIESLAGLETVKLFGAQGQFQYR-------WEEAVAHMAN 364
           R  R     S     K    L +++    TVK FGA+ +   R       W EAV  M  
Sbjct: 200 RYVRPSNLKSNALDSKIGGALADAVTSNPTVKSFGAETREAERLAKVTAQWREAV--MVT 257

Query: 365 WNIKSRRITDSI--QNTAGFVQQAANIGMIIVGVYLISNGDLTMG----GLIAATMLSG- 417
           WN    R TD    QN    V QA   G ++ G    + G  T G     + A  ++SG 
Sbjct: 258 WN----RFTDVWLGQNLLLVVLQAGLTGAMVWGW---TQGTATPGDVAFAITAFMLMSGY 310

Query: 418 -RAIGPLVQLSLLSTRYNQAKSSMT-IIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVT 475
            R +G  +++        +  ++ T +  Q+   P+  E            G IE   VT
Sbjct: 311 LRNLGENIRMLQKGLDDTEDVAAWTRLAPQIADDPNAPEFQPG-------SGAIEFQDVT 363

Query: 476 FHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDIS 535
           F Y  +        SL I PGE+VA++G  GSGK+T  +LI  L+   +G V ID  D+S
Sbjct: 364 FRYKAAGAPLYDRFSLKIAPGERVALVGPTGSGKSTFVKLIQRLHDLQDGAVVIDGQDVS 423

Query: 536 QLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAG 595
            +    +RR I  VPQD  LF+ ++ +NI  G+P +   EV DAA +A    F  + P G
Sbjct: 424 TVKQASLRRAIAVVPQDPALFHRTLFENIAYGKPDATREEVEDAAIKARAHEFILRLPKG 483

Query: 596 LERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPS 655
            +  VGE G+ LSGG+RQ V+IARAFL   P+L++DE TS++D  +E H+++    L   
Sbjct: 484 YDTLVGERGVKLSGGERQRVAIARAFLADAPILVLDEATSSLDVETEGHVQEAAEALMEG 543

Query: 656 ETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHEV 691
            T I+I H+ S +   DR++V + G ++ +G   E+
Sbjct: 544 RTTIVIAHRLSTVRGADRILVFQGGRVVEEGRHAEL 579