Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein from Caulobacter crescentus NA1000

 Score =  192 bits (489), Expect = 3e-53
 Identities = 146/491 (29%), Positives = 244/491 (49%), Gaps = 16/491 (3%)

Query: 211 LRSYFIDVAGKKSDILISSKLFSKVMGIRMEA-RPPSVGAFARHLQEFESIREFFTSATI 269
           LR +FI   G++    +  KL+   + +          G     L    ++ E    A+I
Sbjct: 113 LRFFFITRLGERVVADLRRKLYGHTLSLDQPYFLKTRTGEVLSRLTTDVALVEQLVGASI 172

Query: 270 S-SLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQK 328
           S +L ++   +  L  + +++  L    V+ V +++   FL+  R+++     +  A  +
Sbjct: 173 SIALRNILNLIGGLTAMAVVSPKLAGFIVLMVPVILAPMFLVGRRVRKL----TVTAQDR 228

Query: 329 YANLI----ESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQ 384
           +A+ +    ESL  LETV+ FG +     R+  AV   A +    RRIT     TA  + 
Sbjct: 229 FADAVGYAGESLDALETVQAFGRESASSGRFGAAVE--AAYKASVRRITTRATMTAMVIT 286

Query: 385 QA-ANIGMII-VGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTI 442
            A   I +++  G  L+  G++T G L    ML+  A G +  L  +     +A  +M  
Sbjct: 287 LAFGGITLLLWTGARLVLAGEMTGGTLAQFAMLAVMAAGSIGALGEVWGDVQKASGAMDR 346

Query: 443 IEQVMSMPDEQEEGKRYIHRPII-QGKIELDRVTFHYPNSP-IASVRDLSLTIHPGEKVA 500
           I ++++   +     +    P+  QG+I  + V F YP  P + ++    L + PGE VA
Sbjct: 347 ISELLNAKPDIAAPPQPKTLPVPGQGEIAFENVVFAYPGRPDLPALNGFDLRVKPGETVA 406

Query: 501 IIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSI 560
           ++G  G+GK+T+ RL++  Y P  G + +D  ++      ++R  +  V QDS LF GS 
Sbjct: 407 LVGPSGAGKSTVLRLLLRFYDPQSGCILLDGVNLRDAEPAEVRARMALVAQDSPLFSGSA 466

Query: 561 RDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARA 620
            DNI  GRP + D +V  AA+ A  T F    P G +  VGE    LSGGQRQ ++IARA
Sbjct: 467 MDNIRFGRPDATDEQVRAAADAAQATGFLSALPEGFDTPVGERAKTLSGGQRQRLAIARA 526

Query: 621 FLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVMEKG 680
            +   P+LL+DE TSA+D  SE  ++Q L+      T ++I H+ + +   DR++VME+G
Sbjct: 527 LVREAPILLLDEATSALDAESEQLVQQALATAMEGRTTLVIAHRLATVLKADRIVVMEEG 586

Query: 681 CIIADGPKHEV 691
            ++  G   E+
Sbjct: 587 RVVEQGAHAEL 597