Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 1018 a.a., peptidase C39 from Burkholderia phytofirmans PsJN

 Score =  253 bits (646), Expect = 3e-71
 Identities = 161/547 (29%), Positives = 283/547 (51%), Gaps = 6/547 (1%)

Query: 151  KHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFKM 210
            K I   + +A+ +I +  V  P+  + + D V+ +     L +L  G+++  +F  +   
Sbjct: 457  KKILGHLFLATFVIQVLGVIPPLIIQNILDGVIVHQNVSLLHLLIGGLIISNVFSQLMSS 516

Query: 211  LRSYFIDVAGKKSDILISSKLFSKVMGIRME--ARPPSVGAFARHLQEFESIREFFTSAT 268
            +R+Y  +   +  D  + S+ F   M +     A+  +   FAR  QE ++IR F T +T
Sbjct: 517  IRAYLANFMVRNMDFAMMSQFFKHTMSLPFSFFAKRKTGDIFAR-FQENQTIRAFLTEST 575

Query: 269  ISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQK 328
            +++ ++L    ++  ++++    +  V +  V+ ++  + +   ++K    E    +++ 
Sbjct: 576  VTTALNLLMVFIYFTIMFVYNVKMTLVLIAFVIPIMALTAIATPKIKGYAREVFTASTES 635

Query: 329  YANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQQAAN 388
             + L+E+LAG+ET+K  G +   + RWE+  A       ++      +   +  +  A  
Sbjct: 636  KSFLMEALAGVETIKGMGIERPVRLRWEKKYAKALEVQYRAHAFNILVGLGSQLLNSATT 695

Query: 389  IGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTIIEQVMS 448
            I ++ VG  L+   ++T+G LIA     G  +GPL+ L  L +  N A  +M  +  V+ 
Sbjct: 696  IAILWVGANLVLAREMTIGQLIAFNAFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLD 755

Query: 449  MPDEQ--EEGKRYIHRPIIQGKIELDRVTFHYPNSPIASV-RDLSLTIHPGEKVAIIGRI 505
            +  EQ  ++    +  P +QG+I L  V F Y  +  A V  ++S  I PGE VAI+GR 
Sbjct: 756  IEPEQKPQDLPSRVMLPELQGEISLSGVYFRYGENDSAYVLENISFDIKPGELVAIVGRS 815

Query: 506  GSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNIT 565
            GSGKTTL +L++G Y PTEG + ID  D+  +     R  IG V Q ++LF G+I +NI 
Sbjct: 816  GSGKTTLAKLLVGFYTPTEGKMTIDGYDLGVVDKAYYRAQIGYVMQSNLLFSGTISENIA 875

Query: 566  LGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAFLGRP 625
             G    D R + + A  A    F  + P G E+ VGE G+ LSGGQ Q + IARA    P
Sbjct: 876  SGDDAPDRRRIEEVAKMADAHGFISKMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDP 935

Query: 626  PVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVMEKGCIIAD 685
             +L+ DE TSA+D++SE +I   +  +    T ++I H+ S +   D+++V+ +G I+  
Sbjct: 936  RLLVFDEATSALDSQSESNILGNMHDILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQ 995

Query: 686  GPKHEVL 692
            G   E++
Sbjct: 996  GRHDELI 1002