Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1092 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (251), Expect = 2e-25
 Identities = 97/424 (22%), Positives = 186/424 (43%), Gaps = 24/424 (5%)

Query: 232  QLRERAYLDPVSHLGNRAYYMSQLSGWLS----ESGIGGVAILQAEFIKELYEEKGYEAG 287
            Q+R  AY DP+++L NRA  M +LS  ++     +  G +  L  +  K + +  G+  G
Sbjct: 656  QIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVG 715

Query: 288  DGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMD--ETELKIVAESIITCVDDINP 345
            D +++ +  RL+ S+ ++D ++AR+   EF +++  ++   +++    +++   + ++  
Sbjct: 716  DTVLKIITARLEASVRLED-TVARLGGDEFVVLLSGLEGSRSDVSKQVQTLANTLRELLS 774

Query: 346  DPTGMAKANL----SLGVVSNKRQSST-TTLLSLLDNALAKAKSNPELNYGFISSDTDKI 400
            +P  +    L    S+G+       ST T LL   D AL +AK +         +   K 
Sbjct: 775  EPMFLDGQRLQVTPSIGIALIPDHGSTPTDLLKRADIALYRAKDSGRNTSQMFHTTMQKA 834

Query: 401  ILGKQQWKTLVEEAIHNDWFTFRYQ-AANSSWGKTFHREVFSAF-EKDGVRYTANQFLFA 458
               + + +T +  A+    F+  +Q   ++   +    E    +   D    + N+F+  
Sbjct: 835  ASERLRMETDLRLALARGEFSVHFQPQVDARDNRIIGAEALVRWHHPDLGAQSPNEFIKV 894

Query: 459  LEQLNASHIFDQYVIERVI----QQLEKGELTDP----LAINIAQGSISQPSFIRWISQT 510
            LE          ++++       Q + KG++ DP    L +NI+     Q  F+  I  +
Sbjct: 895  LEDSGLILEVGTWILDEACDGFKQLIAKGKI-DPQQFSLCVNISPRQFRQSDFVERIENS 953

Query: 511  LSKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFR 570
            L  H    +LL  EI EG  +     T      ++  G  F +D++G  + SL Y+    
Sbjct: 954  LVTHGLPFSLLKLEITEGIVIQNLDDTIAKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLP 1013

Query: 571  PKYVKLDYLFTHH-LDDERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVF 629
               +K+D  F      D      + +I   A +L +  IA  VET  QL FL      ++
Sbjct: 1014 VDTLKIDQSFVRDATSDPNDAEIIRAIVAMARSLNLIMIAEGVETLEQLHFLQGLDCHLY 1073

Query: 630  QGFI 633
            QG++
Sbjct: 1074 QGYL 1077