Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (251), Expect = 2e-25
 Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 19/423 (4%)

Query: 228  KEAQ-QLRERAYLDPVSHLGNRAYYMSQL----SGWLSESGIGGVAILQAEFIKELYEEK 282
            K AQ +L  +A+ DP++ L NR  + S+L    +G       G V  L  +  K + +  
Sbjct: 797  KHAQARLDYQAHHDPLTGLPNRTLFESRLLAALNGQQENGSQGAVLFLDLDRFKHINDSL 856

Query: 283  GYEAGDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDE-TELKIVAESIITCVD 341
            G+  GD +++ +A RL+  +   D ++AR+   EF I++P + + ++ + +A+ ++ C  
Sbjct: 857  GHPVGDLLLKGIAVRLREQLRDID-TVARLGGDEFIILLPGLQQPSDAEHIAQKLLNCF- 914

Query: 342  DINPDPTGMAKANLSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKII 401
               P   G  +  +S  + ++        + +L+ NA A    +       + S T  + 
Sbjct: 915  -AAPFQAGEHEFFISASIGTSLYPQDGCDVATLVKNADAAMYRSKAKGRNRVESYTRDLT 973

Query: 402  LGKQQWKTLVEE---AIHNDWFTFRYQAANSSW-GKTFHREVFSAFEKDGVRYTANQFLF 457
                +   L  E   AI  +  +  +Q   S    +    E    +          +   
Sbjct: 974  AQASERVALEHELRRAIERNELSLSFQPKISLVDNQLVGAEALIRWTHPTFGDVPPEHFI 1033

Query: 458  ALEQLNASHI-FDQYVIERVIQQL----EKGELTDPLAINIAQGSISQPSFIRWISQTLS 512
             L + N   +    +V+ER  +QL    +  +   PL++N+A   + QP+ +  I Q L 
Sbjct: 1034 PLAEENGMILQIGDWVLERACRQLCEWNDAYDSLGPLSVNLAGAQLRQPNLLGRIEQLLR 1093

Query: 513  KHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPK 572
            +H     LL  EI E   +++        + ++  G    +D++G  + SL Y+      
Sbjct: 1094 EHQLEPGLLQLEITENFIMSQAEEALTVLHQLKKLGVQLAIDDFGTGYSSLSYLKRLPLD 1153

Query: 573  YVKLDYLFTHHL-DDERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQG 631
             +K+D  F   L DD      + +I     ++  T IA  VET  Q  FL+E   E  QG
Sbjct: 1154 ILKIDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTIIAEGVETLAQQQFLTEEGCEQIQG 1213

Query: 632  FIV 634
            +IV
Sbjct: 1214 YIV 1216