Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (248), Expect = 2e-25
 Identities = 94/418 (22%), Positives = 183/418 (43%), Gaps = 19/418 (4%)

Query: 233 LRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGGVAI--LQAEFIKELYEEKGYEAGDGM 290
           L+  A  DP++ + NR  + + L+  L+E+   G+A+  L  +  +   +  G++AGD +
Sbjct: 120 LQRLAEQDPLTGIANRQGFQTLLAARLAENDGRGLALGHLDLDNFRHANDALGHQAGDRL 179

Query: 291 VRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGM 350
           + ++  RLK+S+   D  +AR+ + EF +++   D       AE +   + +   +P  +
Sbjct: 180 ILQVVSRLKSSLEAGD-QLARLGSDEFALLI---DTRRAPQRAEWMAERITEALAEPYWV 235

Query: 351 AKANL----SLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQ 406
              +L    SLGV   + Q+    L+     A+ +AKS     +   +   ++       
Sbjct: 236 DGESLLIGCSLGVAHARAQAGADPLMWHAHIAMQQAKSTQGCTFHIFNERINRNARSLAD 295

Query: 407 WKTLVEEAIHNDWFTFRYQAA-NSSWGKTFHREVFSAFEKDGVR--YTANQFLFALEQLN 463
            ++ +  A+  D     YQ   N   G     E    + + G R     ++F+   EQ  
Sbjct: 296 LESELRRALRRDELELHYQPRLNLDGGHIVGLEALVRW-RHGERGLLPPSEFVPLAEQSG 354

Query: 464 ASHIFDQYVIERVIQQL----EKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVAN 519
                  +VI R ++ +    E+G     +A+N++         +  +S+ +++    A 
Sbjct: 355 LIVPLGYWVISRALRDMQALRERGLAPLHMAVNLSFRQFQDSQLLPTLSRLIAERGVEAQ 414

Query: 520 LLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYL 579
            L FE+ E   +          +A+   G  F +D++G  F S  ++N      +K+D  
Sbjct: 415 WLEFELTETAVMRRSELVKQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPIALLKIDKS 474

Query: 580 FTHHLDD-ERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFIVDK 636
           F   ++  E  +  + ++   AHNL +  +A  VETQ QLD L     +  QGF++ K
Sbjct: 475 FVGGMEQREENRKLVHAMINLAHNLNLEVVAEGVETQEQLDLLRGFGCDQVQGFLISK 532