Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 797 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 95.1 bits (235), Expect = 1e-23
 Identities = 93/411 (22%), Positives = 169/411 (41%), Gaps = 14/411 (3%)

Query: 231 QQLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGGVAILQAEFIKELYEEKGYEAGDGM 290
           Q+LR  A+ DP++ L NR Y M +L   LS      +  L  +  K + +  G+E GD +
Sbjct: 364 QRLRFLAHFDPLTQLANRNYLMQRLEQLLSARLPLSLLYLDLDHFKRINDSLGHEVGDKL 423

Query: 291 VRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGM 350
           + ++ DRL   +  +   ++R    EF +++   D    + +A  II   D   P P  +
Sbjct: 424 LVQIGDRL-GQLMPEHALLSRTGGDEFMLLLDGCDIASAEQLARRII---DGFQP-PVRI 478

Query: 351 AK----ANLSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQ 406
            +     + S+G+  +  + S + LL  +D AL  AK          +    +   G++ 
Sbjct: 479 GQYECFVSPSIGITVSDGRHSASDLLKQVDLALYAAKDAGRNCTVVYNEALSEAAAGRRA 538

Query: 407 WKTLVEEAIHNDWFTFRYQAANSSWGKTFHREVFSAFEK-DGVRYTANQFLFALEQLNAS 465
            +  +  A+  D F   YQA  ++ G+    E    +   +       +F+  LE     
Sbjct: 539 LEQALRRALDRDEFVLHYQAQVNAQGEPEVMEALLRWNSPERGLVPPGEFIPVLEDSGMI 598

Query: 466 HIFDQYVIERVIQQLEKGELTD---PLAINIAQGSISQPSFIRWISQTLSKHLSVANLLH 522
               ++V     +Q  +         +A+N++     Q      +   L +  +  ++L 
Sbjct: 599 IEATRWVFREACRQACRWHAQGYSLRIAVNLSPLDFRQADLAGSLLAILEEEGASTSMLE 658

Query: 523 FEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTH 582
            EI E   +    +       ++ AG    +D++G  + SL Y+  FR   +K+D  F  
Sbjct: 659 LEITESALLEADEHVQQTLTRLKAAGLPLLLDDFGTGYASLTYLQRFRFDGIKIDREFVS 718

Query: 583 HLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGF 632
            L D  +   L   I   A +LG+  +A  VE + Q  FL  +     QGF
Sbjct: 719 GLPDSEESVALVRGILTMASHLGLHVVAEGVENERQAAFLRLNGCPSLQGF 769