Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  181 bits (460), Expect = 7e-50
 Identities = 145/634 (22%), Positives = 294/634 (46%), Gaps = 17/634 (2%)

Query: 1   MTLYKQLVAGMIAVFILLLISVFTIEFNTTRNSLEQQQRSEVNNTINTVGLALAPYLEKK 60
           M+L KQL   +    ++     F      +R     Q RS   +    + L++ P+ +  
Sbjct: 1   MSLLKQLFLAICLFLVVAFTGGFIASVENSREQSINQLRSHAQDAATALALSMTPHAD-- 58

Query: 61  DTIAVESVINALFDGSSYSIVRLIFLDDGTEIL-RSYPIQPNNVPAWFTQLNLFEPIHDR 119
           D + +E + N++FD   +S +R++ + D + I+ R+  IQ   VP WF  +    P    
Sbjct: 59  DPVMLELLANSIFDSGYFSSIRVLRIPDDSPIVERNANIQLQQVPGWFATIVDLPPQGGD 118

Query: 120 RVVTSGWMQLAEVEIVSHPGAAYAQLWKALIRLSIAFLAILVIGMFAVAFILKRSLRPLQ 179
            ++  GW Q A VE+ SHP  A A+LW + +   +  LA   +      ++L+  LRPL 
Sbjct: 119 ALIMRGWEQAARVEVFSHPQFALAKLWDSTLATLLWLLACGAVSALLGGWLLRSQLRPLD 178

Query: 180 LIVNKMEQVANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRERAYL 239
            +V +   +   +F      P T +L  VV  +N+M ++++  F  +A+ +++LR++AY 
Sbjct: 179 RMVEQAHAITQREFITLPHLPRTPELRRVVQAMNQMVDKLKTLFAEEAERSEKLRQQAYQ 238

Query: 240 DPVSHLGNRAYYMSQLSGWLS---ESGIGGVAILQAEFIKELYEEKGYEAGDGMVRELAD 296
           D ++ L +R     +LS  L+       G + +LQ   +  L +  G +  D ++  + +
Sbjct: 239 DDLTGLASRRLLDLRLSTQLAPDEHHAEGYLLLLQIHDLNGLNQRYGGQFSDRLIVAIGE 298

Query: 297 ---RLKNSITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAKA 353
              RLK+     D   AR    EF ++ P + + E+  +  ++   ++ + P  +  +  
Sbjct: 299 QLMRLKSRRGRADWLAARNRGSEFVLLAPGLHQDEVTPLLNALSDELETLRPTGSTDSIP 358

Query: 354 NLSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEE 413
              +GV + +   +   +L   D ALA+A++     +  +     + +  +  W   +++
Sbjct: 359 VAHIGVTAFRLGETPQDVLERADQALAQAQAG-NTAWQLLEGYWAQPLRDQHSWHETLQQ 417

Query: 414 AIHNDWFTFRYQAAN--SSWGKTFHREVFSAFE-KDGVRYTANQFLFALEQLNASHIFDQ 470
           A+ +       Q     +   +  H +V +      G   TA +FL  LE+L  +  FD 
Sbjct: 418 ALADSALALYVQPVGLAAEPAQILHHKVLARLPIASGEPLTAGRFLPWLERLGWAARFDY 477

Query: 471 YVIERVIQQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEIPEGCF 530
            ++E VI +L+      PLA++++  ++     ++ +   L  + + A+ L  E+ +   
Sbjct: 478 IMLELVIARLKLA--PQPLALSLSAATLRDARHLQQVFALLHSNPAEASHLILEL-DALH 534

Query: 531 VNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTHHLD-DERQ 589
           +    +   +   VR  G   G+ ++G +F  + ++      +VK+D  +   +D DE +
Sbjct: 535 LPVDVHLQHWSQKVRTTGTRLGLQHFGGDFSKIGHLAHLGLAHVKVDGAYIRGIDKDEDK 594

Query: 590 KFTLTSISRTAHNLGITTIASRVETQTQLDFLSE 623
           +  + +I RT +++ +  IA  VETQ +L  L+E
Sbjct: 595 RLFIEAIYRTTNSIDLPLIAEMVETQGELKVLTE 628