Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  100 bits (249), Expect = 3e-25
 Identities = 101/428 (23%), Positives = 187/428 (43%), Gaps = 29/428 (6%)

Query: 228 KEAQ-QLRERAYLDPVSHLGNRAYYMSQLSGWL---SESG-IGGVAILQAEFIKELYEEK 282
           K+AQ +L  +A+ DP++ L NR  + S+L   L    ESG +G V  L  +  K + +  
Sbjct: 378 KQAQARLDYQAHHDPLTGLPNRILFESRLQAALLHSEESGSLGAVLFLDLDRFKHINDSL 437

Query: 283 GYEAGDGMVRELADRLKNSITIKDI-SIARISTYEFGIIMPNMDET-ELKIVAESIITCV 340
           G+  GD +++ +A RLK   T++DI ++AR+   EF +++P + +T + + +A  ++ C 
Sbjct: 438 GHPVGDLLLKGIAHRLKE--TLRDIDTVARLGGDEFIVLLPGLLQTSDAQAIANKLLACF 495

Query: 341 DDINPDPTGMAKANLSLGVVSNKRQSSTTTLLSLLDNA-------LAKAKSNPELNYGFI 393
               P   G  +  +S  + S    +  T + +L+ NA        AK ++  E     +
Sbjct: 496 S--TPFEAGEHELYISPSIGSCVFPTDGTDVATLVKNADAAMYRSKAKGRNRVESYTCDL 553

Query: 394 SSDTDKIILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGKTFH-REVFSAFEKDGVRYTA 452
           S    + I  +Q+    +  A+  +  T  YQ        T    E    +         
Sbjct: 554 SDQASERIALEQE----LRRALERNQLTLAYQPKIDLLTHTMAGAEALIRWNHPTFGEVP 609

Query: 453 NQFLFALEQLNASHI-FDQYVIERVIQQLEKGELT----DPLAINIAQGSISQPSFIRWI 507
            +    L + N   +    +V+E+  +Q+     T     PL++N+A   + Q + +  I
Sbjct: 610 PEHFIPLAEENGMILQIGDWVLEQACRQMGIWRKTCQPFGPLSVNLAGAQLRQTNLLERI 669

Query: 508 SQTLSKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYIN 567
            Q L+ +      L  EI E   +++        + ++  G    +D++G  + SL Y+ 
Sbjct: 670 EQLLTDNGLEPGCLQLEITENFIMSQTQEALAVLHQLKTLGVQLAIDDFGTGYSSLSYLK 729

Query: 568 EFRPKYVKLDYLFTHHL-DDERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFI 626
                 +K+D  F   L +D      + +I     +L +T IA  VE   Q  FL+    
Sbjct: 730 RLPLDILKIDQSFVRGLPEDTHDAAIVRAIIALGRSLQLTVIAEGVENSEQQQFLTSEGC 789

Query: 627 EVFQGFIV 634
           E  QG+I+
Sbjct: 790 EQIQGYII 797