Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1278 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (279), Expect = 1e-28
 Identities = 103/421 (24%), Positives = 188/421 (44%), Gaps = 22/421 (5%)

Query: 232  QLRERAYLDPVSHLGNRAYYMSQLSGWLS----ESGIGGVAILQAEFIKELYEEKGYEAG 287
            ++   AY D ++HL NR  +  +L   L     +     +  L  +  K + +  G+ AG
Sbjct: 838  RIHRLAYYDALTHLPNRTLFQDRLHSALQHAERQQAWVVLMFLDLDRFKPINDSLGHAAG 897

Query: 288  DGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKI-----VAESIITCVDD 342
            D M++E+A RL   +++ D ++AR+   EF +++   +  E  +     VAE I+T +  
Sbjct: 898  DRMLQEMATRLLACVSVDD-TVARMGGDEFTLLLEPDESREAALNRAIHVAERILTSL-- 954

Query: 343  INPDPTGMAK--ANLSLGV-VSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDK 399
            I P      +     S+G+ +S +     + L+   D A+  AK   + N+ F  +D + 
Sbjct: 955  ITPFVLEGREFFVTASIGIALSPQDGKELSQLMKNADTAMYHAKERGKNNFQFYQADMNA 1014

Query: 400  IILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGK--TFHREVFSAFEKDGVRYTANQFLF 457
              L + + ++ +  A+    FT  YQ   S  GK  T    +             N F+ 
Sbjct: 1015 TALERLELESDLRHALEQKEFTLFYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPNDFIP 1074

Query: 458  ALEQLNASHIFDQYVIERVIQQLE---KGELTDP-LAINIAQGSISQPSFIRWISQTLSK 513
             LE+L        +V+    +QL+   +  +  P +++NI+    S     + I+  L +
Sbjct: 1075 VLEELGLVVEVGDWVLAEACRQLKHWHQARVRVPKVSVNISARQFSDGQLGKRIAHILEQ 1134

Query: 514  HLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKY 573
                   L  E+ E   + E +      + ++N G    VD++G  + SL+Y+ +F    
Sbjct: 1135 AGLSPACLELELTESILMREVNEAMQILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDV 1194

Query: 574  VKLDYLFTHHLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGF 632
            +K+D  F   L    Q   +  +I   AH+L ++ IA  VET  QL+FL EH  +  QG+
Sbjct: 1195 LKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLSVIAEGVETHEQLEFLREHDCDEVQGY 1254

Query: 633  I 633
            +
Sbjct: 1255 L 1255