Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 748 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  101 bits (251), Expect = 1e-25
 Identities = 99/436 (22%), Positives = 194/436 (44%), Gaps = 25/436 (5%)

Query: 222 AFKAQAKEAQQLRER----AYLDPVSHLGNRAYYMSQLSGWL----SESGIGGVAILQAE 273
           A +++ +E +++ E     A+ D ++ L NRAY M++L+       S      V  L  +
Sbjct: 298 ALQSRLEERERMSEELTYIAFHDELTSLFNRAYLMNELTTAFETRKSRYERATVLFLDLD 357

Query: 274 FIKELYEEKGYEAGDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKI-V 332
             K + +  G+ AGD +++ +A+RL+  +   D+ +ARI   EF I++   D+ E  + +
Sbjct: 358 GFKVVNDSMGHLAGDQLLKGVANRLQTCVRSNDV-LARIGGDEFAILLMGKDQPETAVKM 416

Query: 333 AESIITCVDDINPDPTGMAKANLSLGVVS-NKRQSSTTTLLSLLDNALAKAKSNPELNYG 391
           AE I++ ++            + S+G+VS  +  +    LL   D A+  AK      + 
Sbjct: 417 AERIVSQLNTAIQIEGQDIFISCSIGIVSAGESHTKPEELLRDADVAMYSAKKQGRGRWS 476

Query: 392 FISSDTDKIILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGKTFHREVFSAFEK-----D 446
             ++   +  +     +  + +A+ +  F   YQ   S  G   H     A  +      
Sbjct: 477 IFNTSMREAAIDTLMIQNALRQALEDKDFLVFYQPIYS--GNCEHLVGVEALVRWNHATM 534

Query: 447 GVRYTANQFLFALEQLNASHIFDQYVIERVIQQL-----EKGELTDPLAINIAQGSISQP 501
           G+  + + F+   E L   H    +V+ +   ++     E   L   L +N++   +S P
Sbjct: 535 GI-ISPDAFIPIAEDLGIIHELGAWVMHKACSEVQAWRKEFSHLDLRLNVNVSGKELSHP 593

Query: 502 SFIRWISQTLSKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQ 561
            F+  +++ ++     A  L  E+ E  F+ +P   A     +R  G    +D++G  + 
Sbjct: 594 GFVDRVTRIIASTGLPATQLQIEVTESVFLYQPDAIAEILRQIRQLGVRVALDDFGTGYS 653

Query: 562 SLDYINEFRPKYVKLDYLF-THHLDDERQKFTLTSISRTAHNLGITTIASRVETQTQLDF 620
           SL YI+ +    VK+D  F +  +  ER +  ++SI      L +   A  VET  Q + 
Sbjct: 654 SLGYIDRYPIDAVKIDRSFVSRMMTYERSEAIVSSILSLGRALNLDITAEGVETAEQYNL 713

Query: 621 LSEHFIEVFQGFIVDK 636
           L +     FQG+++++
Sbjct: 714 LRKMGCPYFQGYLLNR 729