Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (262), Expect = 7e-27
 Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 22/431 (5%)

Query: 226 QAKEAQ-QLRERAYLDPVSHLGNRAYYMSQLSGWLS----ESGIGGVAILQAEFIKELYE 280
           + KE++ ++ + AY D ++ L NR   M +L   ++       IG + I+  +  K L +
Sbjct: 256 ERKESEARIYQLAYYDVLTGLANRTLLMERLKAAIALCERSKQIGALLIIDLDNFKILND 315

Query: 281 EKGYEAGDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNM--DETELKIVAESIIT 338
             G++ GD +++ +ADRL  ++   ++ +AR+   EF I+M N+  DE    + A+S+  
Sbjct: 316 TMGHDVGDALLKMVADRLLQAVRRCEL-VARLGGDEFVIVMENLGIDERGAALKAKSVGQ 374

Query: 339 CVDDINPDPTGMAKANL----SLGV-VSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFI 393
            V  +  DP  +A   L    S+G+ +  + +     LL   D A+ +AK   +    F 
Sbjct: 375 KVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLEELLKQADVAMYQAKEAGKNALRFF 434

Query: 394 SSDTDKIILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGKTFHREVFSAFEKDGVR--YT 451
                  +  +   +  +   +  + F    Q    + G+    EV   ++   VR    
Sbjct: 435 DPAMQAAVEERVALENDLRNGVLENEFRLFCQPQVDACGRLCGGEVLIRWQHP-VRGLVM 493

Query: 452 ANQFLFALEQLNASHIFDQYVIERVIQQLEKGELTDPLA-----INIAQGSISQPSFIRW 506
            NQF+   EQ +      ++V+ +  + L + E    LA     +N++   +   +F+  
Sbjct: 494 PNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHPSLAQISLSVNVSVNQVRDHNFVER 553

Query: 507 ISQTLSKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYI 566
           +   +    +    +  E+ E           L  NA+R  G  F VD++G  + SL Y+
Sbjct: 554 VLAIIDDCGANPARIMLELTESLMAENVEEIILKMNALRVRGVRFSVDDFGTGYSSLSYL 613

Query: 567 NEFRPKYVKLDYLFTHHLDDERQKFTLTSISRT-AHNLGITTIASRVETQTQLDFLSEHF 625
             F    +K+D  F   +   +    +T I  T A  LG+  +A  VET+ QL+FL  H 
Sbjct: 614 KRFPLSELKIDQSFVREIALNQHDAVITEIIITLAKKLGLGVLAEGVETEDQLNFLLAHD 673

Query: 626 IEVFQGFIVDK 636
              FQG++  K
Sbjct: 674 CSYFQGYLFGK 684