Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 97.1 bits (240), Expect = 5e-24
 Identities = 93/422 (22%), Positives = 186/422 (44%), Gaps = 15/422 (3%)

Query: 228  KEAQQLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGG----VAILQAEFIKELYEEKG 283
            K  + LR  A  DP+++L NR  +  +L   L+++   G    +  L  +  K + +  G
Sbjct: 1057 KAEEDLRLLASYDPLTNLPNRTLFQDRLDHALAQAHRTGNMVALLFLDLDRFKHINDSMG 1116

Query: 284  YEAGDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELK-IVAESIITCVDD 342
            +  GD +++ +A RL+N +   D ++AR+   EF II+  + +T+   ++AE +I     
Sbjct: 1117 HHIGDLLLKAVAHRLQNCVREGD-TVARLGGDEFTIILEGVAKTKAATVIAEKLIRAFQT 1175

Query: 343  INPDPTGMAKANLSLGVVSNKRQSS-TTTLLSLLDNALAKAKSNPELNYGFISSDTDKII 401
                       + S+G+      +S +T+L+   D A+  AKS    N+ F +   ++  
Sbjct: 1176 PFILEDQALNISPSIGISLYPMDASDSTSLVKYADTAMYHAKSLGRNNFQFYTLRLNEYA 1235

Query: 402  LGKQQWKTLVEEAIHNDWFTFRYQAAN--SSWGKTFHREVFSAFEKDGVRYTANQFLFAL 459
            +   Q +  +++AI     +  +Q     S    T    +     K+    +  +F+   
Sbjct: 1236 MRHVQLEAGIKQAIVRQELSLVFQPKFRVSDGSITGFEALLRWNSKELGPISPAEFIPLA 1295

Query: 460  EQLNASHIFDQYVIERVIQQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVAN 519
            E++   +    +V+    + + +        +++A  ++S       I  T+   L+VA 
Sbjct: 1296 EEIGIINQLGHWVVNEACRHMAQFAAAGFDDLHVAV-NLSARQLKADILSTIEVALAVAG 1354

Query: 520  L----LHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVK 575
            L    L  E+ E   +  P  +      ++  G    VD++G  + SL Y+  F    +K
Sbjct: 1355 LPAKCLELELTESMIMKSPQESVAVLQRLKALGVSLAVDDFGTGYSSLAYLKRFPLDTLK 1414

Query: 576  LDYLFTHHLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFIV 634
            +D  F   +  +     +T +I   AH+L +  +A  VE + QL+ L +H  +  QGF++
Sbjct: 1415 IDREFVRDISTDPDDAAITGAIIALAHSLELNVVAEGVENEAQLEHLRKHGCDQVQGFLL 1474

Query: 635  DK 636
             K
Sbjct: 1475 GK 1476