Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  334 bits (857), Expect = 6e-96
 Identities = 190/637 (29%), Positives = 345/637 (54%), Gaps = 9/637 (1%)

Query: 1   MTLYKQLVAGMIAVFILLLISVFTIEFNTTRNSLEQQQRSEVNNTINTVGLALAPYLEKK 60
           MTL++QL + +  +F+L++ ++  ++F  T++ L +Q  S++NN  N++GL L P LE  
Sbjct: 1   MTLFRQLYSLLFGLFLLVITALAYVQFTETKSFLTKQMESDLNNVSNSLGLLLVPALETG 60

Query: 61  DTIAVESVINALFDGSSYSIVRLIFLDDGTEILRSYPIQPNNVPAWFTQLNLFEPIHDRR 120
           D    E++IN +F+G  Y  V+L +L DG +   +  ++   VP WF  L +F  I    
Sbjct: 61  DIATAETLINVIFEGGYYQQVKLTWLVDGKQQEWNNSLEIQGVPQWFINLGIFGTIKRES 120

Query: 121 VVTSGWMQLAEVEIVSHPGAAYAQLWKALIRLSIAFLAILVIGMFAVAFILKRSLRPLQL 180
            +TSGW+QLA++E+ +HPG  Y +LW+ L    I F  + ++ +F   F L   L+PL +
Sbjct: 121 TITSGWLQLAQLEVTAHPGFGYHELWRILTNTIIVFSILFLVAIFLARFGLSWILKPLHI 180

Query: 181 IVNKMEQVANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRERAYLD 240
           +    + +AN QFG  L  P T +L  VV   N MS Q+++ F +  +E   LR++  +D
Sbjct: 181 VSEHAKSIANRQFGPELAIPKTSELKEVVIAFNSMSSQLKQIFSSLDEEVTALRKKNLVD 240

Query: 241 PVSHLGNRAYYMSQLSGWLSESGIGGVAILQAEFIKELYEEKGYEAGDGMVRELADRLKN 300
            VS L NR Y + +++ WLSE G G + + + ++++E++ + GY+  D  ++ L+++L++
Sbjct: 241 QVSGLPNRQYLVGRINSWLSEPGSGALFMAKFDWLEEVHAKYGYQVRDETIKLLSEKLQS 300

Query: 301 SI-TIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAKANLSLGV 359
            +  I    +ARI+ +EF  ++ ++D+  +    +++I  V+       G    + ++G+
Sbjct: 301 QLEEIAPGVVARIAAFEFAFLVFDVDKELISKYLQTLIRTVNQEISKAGGKPNEHFAIGI 360

Query: 360 VSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEEAIHNDW 419
                  + + +L+  DNAL  A  + ++ + F SS+    +  ++QW+  +  AI+   
Sbjct: 361 AERIGSMTVSDILAQSDNALQTAIKSGKVYHWFESSEEQ--MFTREQWREKLSSAINAKL 418

Query: 420 FTFRYQAANSSWGK-TFHREVFSAFEKDGVRYTANQFLFALEQLNASHIFDQYVIERV-- 476
           F FR+Q    + G      E++   E       A QF+  +E L+   + D+ +I++V  
Sbjct: 419 FQFRWQPIQLTDGAGLLQHELYCQLEIGDKLAHAGQFMPYVELLSLGALLDKCLIQKVHD 478

Query: 477 IQQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEIPEGCFVNEPHY 536
           I  LE+    +P+AIN+   S++   F +W+ Q L +   +A+ L F+IPE    + P  
Sbjct: 479 IHLLERN--FEPVAINLTHQSLTDTDFHQWLQQFL-RSTPLADRLCFDIPESGVYSNPEA 535

Query: 537 TALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTHHLDDERQKFTLTSI 596
               C  +R+ GA FG+D++GR F S+ Y+   RP YVKLD  F ++ +++       ++
Sbjct: 536 CEALCAIIRDNGAKFGIDHFGRQFGSMSYLQTLRPSYVKLDQSFAYYDENQHNAELCRAL 595

Query: 597 SRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFI 633
              A  L I  I + ++ + QLD         +QGFI
Sbjct: 596 VNVARGLEIQVIVTGIQEKPQLDRFIPLKTTAYQGFI 632