Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  137 bits (346), Expect = 1e-36
 Identities = 133/575 (23%), Positives = 249/575 (43%), Gaps = 16/575 (2%)

Query: 71  ALFDGSSYSIVRLIF-LDDGTEILRSYPI-QPNNVPAWFTQLNLFEPIHDRRVVTSGWMQ 128
           AL+     SI    F   DGT+  R++   Q    P  F        I D R +  G + 
Sbjct: 61  ALYQHLQQSITLQFFQYTDGTDGSRNFTTGQLQETPESFLARLFPLEISDTRNLPDGRL- 119

Query: 129 LAEVEIVSHPGAAYAQLWKALIRLSIAFLAILVIGMFAVAFILKRSLRPLQLIVNKMEQV 188
           + +++       A +   + LI +   F A L++   A+A  L R +R     V  + ++
Sbjct: 120 MVKLDTNGPRTLAVSLYSEQLIIIGSLFAASLLL-FLALASTLSRKIRYAAEYVKSLTEL 178

Query: 189 ANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRERAYLDPVSHLGNR 248
               F  P       +L  +     +  + +++       E ++L   A+ DP++  G+R
Sbjct: 179 ---NFSPPEQSKLGGELKPLATVFEEARQALKQKIDGLHHENEKLSRAAFQDPITGFGSR 235

Query: 249 AYYMSQLSGWLSESG--IGGVAILQAEFIKELYEEKGYEAGDGMVRELADRLKNSIT-IK 305
           A +  +L          +G +A+LQA  +  + + KG  AGD  + ++A  L+ + +   
Sbjct: 236 ARFTRKLDELAKSQKDLLGSLAMLQATELGTINQLKGRTAGDDYLAKVAGCLRKAGSPFP 295

Query: 306 DISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAKANLSLGVVSNKRQ 365
           D    RIS+ +F + +PN+  ++ +   E + T +D+     T   ++    G+V  K  
Sbjct: 296 DAEFYRISSSDFAVFLPNLVISDAERFLEPLKTLLDEYQS--TSAMESIAYTGLVPYKSG 353

Query: 366 SSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEEAIHNDWFTFRYQ 425
                LLSL D AL+ A++    ++  +   T+   +G  +W+  + E I      F  Q
Sbjct: 354 VDPVGLLSLSDAALSIAQTLGANSFHVLEKFTEDQEIGDNRWQVAITEIITQRAVRFFQQ 413

Query: 426 AANSSWGKT-FHREVFSAFEKDGVRYTANQFLFAL-EQLNASHIFDQYVIERVIQQL-EK 482
                  +   +RE+F+ F     +      + A+ E+   S   D+ V+   ++ L + 
Sbjct: 414 PIQPCRSEVEVYRELFARFFNSEGKVLPTATVIAMAERHGLSQELDKLVVLSAVRMLLDN 473

Query: 483 GELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEIPEGCFVNEPHYTALFCN 542
             +T    +NI+  S +  +F+ W+   L+KH +++N L  EI E         +  F  
Sbjct: 474 PNMTGAYGVNISAVSATDDNFVVWLKDLLTKHRAISNRLVLEINESGLQTNMQGSFRFIR 533

Query: 543 AVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTHHLD-DERQKFTLTSISRTAH 601
            + + G    ++ +G  F S  +  E RP Y+KLD  ++  +D D   KF +  +   A 
Sbjct: 534 EIHSVGTRVSIERFGMGFTSFKFFREVRPDYIKLDATYSEAIDQDANNKFFVRMMIDIAR 593

Query: 602 NLGITTIASRVETQTQLDFLSEHFIEVFQGFIVDK 636
            +G+  IA  VE Q +   L +  ++  QGF + K
Sbjct: 594 RIGVRVIACGVERQEEKLTLEKLMVDGLQGFYIAK 628