Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score = 97.4 bits (241), Expect = 2e-24
 Identities = 92/423 (21%), Positives = 178/423 (42%), Gaps = 17/423 (4%)

Query: 228 KEAQQLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGG----VAILQAEFIKELYEEKG 283
           ++ + +R +A  D ++HL NR   M +L   + ++   G    V  L  +  K++ +  G
Sbjct: 404 RDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYG 463

Query: 284 YEAGDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDETEL-KIVAESIITCVDD 342
           + AGD +++  A RL+N + I D S+ R+   EF +I+ N+++      +AE I+  + +
Sbjct: 464 HSAGDEVLKLTARRLRNCVRISD-SVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSE 522

Query: 343 INPDPTGMAKANL--SLGVVSNKRQSSTTT-LLSLLDNALAKAKSNPELNYGFISSDTDK 399
             P P G  +     S+G+        T   LL   D A+  AK   E  Y   + D  +
Sbjct: 523 --PFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMAR 580

Query: 400 IILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGKTFHREVFSAFEK-DGVRYTANQFLFA 458
             L     ++ +  A+  D F   +Q    +       E    +   +        F+  
Sbjct: 581 RSLALLTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDFIPL 640

Query: 459 LEQLNASHIFDQYVI----ERVIQQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKH 514
            E+        ++ +    +RV+    +G     +++N++       + +  + Q L + 
Sbjct: 641 AEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVET 700

Query: 515 LSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYV 574
                 L  EI E     +  +      A+++ G    +D++G  + SL+Y+  F    +
Sbjct: 701 GLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTL 760

Query: 575 KLDYLFTHH-LDDERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFI 633
           K+D  F    L   +    +++I   A NLG + +A  VE   Q +FL     + FQGF+
Sbjct: 761 KIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFL 820

Query: 634 VDK 636
             +
Sbjct: 821 YSR 823