Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) from Rhodospirillum rubrum S1H

 Score = 98.6 bits (244), Expect = 8e-25
 Identities = 93/440 (21%), Positives = 190/440 (43%), Gaps = 23/440 (5%)

Query: 212 INKMSEQVEKAFKAQAKEAQQLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGG----V 267
           I +M+ ++       A+   +LR  A  DP++ L NR+  +  +   ++   + G    V
Sbjct: 223 IGRMTNRLNHLLGRLAEVQGELRLLATRDPLTDLPNRSLILEMMDATINRVALDGGRCAV 282

Query: 268 AILQAEFIKELYEEKGYEAGDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMD-E 326
             L  +  K + +  G+EAGD +++++  R  +++     ++ R+   EF +++   + E
Sbjct: 283 MFLDLDMFKHVNDSLGHEAGDLILKDIGRRF-DAVVAGLGAVGRLGGDEFVVLIDRYERE 341

Query: 327 TELKIVAESIITCVD-DINPDPTGMAKANLSLGVVSNKRQSSTTT-LLSLLDNALAKAKS 384
            +L  +A  +IT V   I  D T +  ++ S+G+       +T   LL   D A+   K+
Sbjct: 342 DDLARIARRLITTVKRPIEVDGT-LVHSSTSVGIACYPVDGATPQGLLRNADTAMYAVKA 400

Query: 385 NPELNYGFISSDTDKIILGKQQWKTLVEEAIHNDWFTFRYQAA-NSSWGKTFHREVFSAF 443
           +    + F      +  L + + +  +  AI    F   YQ   +    +    E    +
Sbjct: 401 SGPGQWAFFDRSMTENALVRLRTEASLRSAIEKGQFVLHYQPKLDLRSNRISGCEALIRW 460

Query: 444 EKDGVRYTANQFLFALEQLNASHIFDQYVIERVIQQLEKGEL---TDPLAINIAQGSISQ 500
           + +G      +F+   E+    +    +V+    Q   +        P+AIN++   +  
Sbjct: 461 DLNGDLVPPGRFISIAEETGMIYDIGLWVLREACQAQRRWRRHAGAVPIAINVSVRQLKD 520

Query: 501 PSFIRWISQTLSKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNF 560
             FI      +    +   LL  E+ E   ++    +A     +R+ G    +D++G  +
Sbjct: 521 ERFIDDFLDIIQASGADPELLEVEVTESALMSSIEVSAHLLREMRSHGVRLSIDDFGTGY 580

Query: 561 QSLDYINEFRPKYVKLDYLFTHHLDDERQKFTLTSISRT----AHNLGITTIASRVETQT 616
            SL Y+       +K+D  F   L +E      +SI R     A  +G+ T+A  +ET+ 
Sbjct: 581 SSLAYLKNLPIDILKIDRSFVSDLPEE------SSIPRMIIGLAGQMGLRTVAEGIETEG 634

Query: 617 QLDFLSEHFIEVFQGFIVDK 636
           QL +L ++  ++ QGF+++K
Sbjct: 635 QLAWLRDNGCDMIQGFLIEK 654