Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (276), Expect = 2e-28
 Identities = 103/409 (25%), Positives = 186/409 (45%), Gaps = 19/409 (4%)

Query: 240 DPVSHLGNRAYY--MSQLSGWLSESGIGGVAILQAEFIKELYEEKGYEAGDGMVRELADR 297
           DP++ L NRAY+  +  L+          V  +  +  + +    G+ AGD ++ +LA R
Sbjct: 301 DPLTGLPNRAYFEALYDLANPCQCERSTFVGFINLDRFQVVNNVSGHRAGDQLLCQLAAR 360

Query: 298 LKNSITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAKA-NLS 356
           L   +  +D+ IAR+S  EFGI+MPN+D    + VAE I   + +      G + + ++S
Sbjct: 361 LSQLVRKEDV-IARLSGDEFGILMPNIDVQIAEQVAERICQAMANHEFSWEGRSHSVSVS 419

Query: 357 LGVVSNKRQSSTTTLLSLLDNALAKAKSNPEL--NYGFISSDTDKII--LGKQQWKTL-V 411
           +G+   + +S   ++  LL  A A  +   E   N  +  S  D ++  L  +   ++ +
Sbjct: 420 MGLA--RCESEVDSVSDLLRRASAACRLAKEKGGNAWYFYSTQDPVVEKLNTEMSASVDI 477

Query: 412 EEAIHNDWFTFRYQAANSSWGKT--FHREVFSAFEK-DGVRYTANQFLFALEQLNASHIF 468
             A+ ND F   YQ     +      H E+       +G       FL A E+ N +   
Sbjct: 478 VGALANDRFELFYQPIEPLYASDDGLHLEILLRMRSTEGELIPPGIFLPAAERFNLAAKL 537

Query: 469 DQYVIERVI----QQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFE 524
           D++VI++++    + L   +    +++N++  SIS   FI W+   L     + + L FE
Sbjct: 538 DRWVIDKLLRWGSENLALWQSLSMVSVNLSALSISDSEFINWLEMRLLGEPELVSKLCFE 597

Query: 525 IPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTHHL 584
           I E   V++  +     N V+  G    +D++G  F S  Y+      YVK+D  F  HL
Sbjct: 598 ITETAAVSQLDHATGLINTVKPLGCKLALDDFGSGFSSFAYLKLLDVDYVKIDGQFIQHL 657

Query: 585 -DDERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGF 632
            +D   +  + +I +   ++    +A  VE+      L +  +E  QG+
Sbjct: 658 CEDRADQAIVAAICQLGRDMAFEIVAEFVESVEVAKHLQKLGVEFGQGY 706