Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (319), Expect = 2e-33
 Identities = 109/503 (21%), Positives = 219/503 (43%), Gaps = 13/503 (2%)

Query: 141 AYAQLWKALIRLSIAFLAILVIGMFAVAFILKRSLRPLQLIVNKMEQVANNQFGEPLPRP 200
           A     + LI +   +LA+ V+       ++ R  R +   VN ++  A  +F       
Sbjct: 128 ALTHFTQTLIWIVGGYLALAVL----FTLLMARQKRTIGYAVNALDGFAELKFDAIAHSR 183

Query: 201 NTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRERAYLDPVSHLGNRAYYMSQLSGWLS 260
              +L  +   +      +   F    ++ +QL   AY DPV+  G R  +  +L     
Sbjct: 184 FHGELKPLGKALEHCRVALHDKFDQLQQQTEQLNREAYQDPVTLFGTRPKFTEKLDALAK 243

Query: 261 --ESGIGGVAILQAEFIKELYEEKGYEAGDGMVRELADRLKNSIT-IKDISIARISTYEF 317
             +S IG +A+++A  +  + + +G  AGD  +  +A  ++ ++  + +I   RIS+ +F
Sbjct: 244 PGKSRIGLMAMIKATELGHVNQSQGRAAGDDYLAGVATCIRKALQGMPNIEAFRISSADF 303

Query: 318 GIIMPNMDETELKIVAESIITCVDDINPDPTGMAKANLSLGVVSNKRQSSTTTLLSLLDN 377
            + +P++   + +   E +    D+        + A +  G+V  ++     +L+ + D 
Sbjct: 304 AVFIPDLVLKDAQQPLEKLKAQFDEYQQGSDLESVAYI--GMVPYEQGGDALSLVYIADA 361

Query: 378 ALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGK-TFH 436
           A++ A++    +Y      +D+ ++G   WK  +E+ I      F  Q      G    +
Sbjct: 362 AVSIAQTLGPNSYHVQEKLSDEELVGDSHWKLAIEDIIKRRAIKFHAQDIQPCRGADNVY 421

Query: 437 REVFSAFEKDGVRYTANQFLFALEQLNASHI-FDQYVIERVIQQL-EKGELTDPLAINIA 494
           RE+ S F     ++     + A+ + +   +  D+ +I   ++ L +    T  L INI+
Sbjct: 422 RELLSRFYSSEGKFLPTGTVIAMAERHGLSVELDKIIILSTLRLLLDTPTFTGALGINIS 481

Query: 495 QGSISQPSFIRWISQTLSKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVD 554
             S++QP+F  W+     +   +A+ L  E+ E            F   + + GA   V+
Sbjct: 482 TASVNQPAFTAWLKDIFVRQRQIASRLVLEVNEAGMQANIRQAHKFVRDMHSVGARVAVE 541

Query: 555 NYGRNFQSLDYINEFRPKYVKLDYLFTHHLD-DERQKFTLTSISRTAHNLGITTIASRVE 613
           ++G  F S  +  E RP ++KLD  ++  +D D   +F +  I   A    +  IAS +E
Sbjct: 542 HFGMGFTSFKFFKEVRPDFIKLDGSYSQGIDTDSNNRFFVKMIVDVARKQSVKVIASSIE 601

Query: 614 TQTQLDFLSEHFIEVFQGFIVDK 636
            Q +   L +  ++  QGF + K
Sbjct: 602 RQEEKFALEQLLVDGLQGFYIAK 624