Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  337 bits (864), Expect = 1e-96
 Identities = 188/639 (29%), Positives = 349/639 (54%), Gaps = 13/639 (2%)

Query: 1   MTLYKQLVAGMIAVFILLLISVFTIEFNTTRNSLEQQQRSEVNNTINTVGLALAPYLEKK 60
           MTL++Q+ + +  +F++++IS+  ++F  T++ L +Q  S++NNT +++G+ L P LE  
Sbjct: 1   MTLFRQIYSLLFGLFLVVVISLAYVQFTETQSFLTKQMESDLNNTSHSLGIMLVPDLEAG 60

Query: 61  DTIAVESVINALFDGSSYSIVRLIFLDDGTEILRSYPIQPNNVPAWFTQLNLFEPIHDRR 120
           D +  E++IN +F+G  Y  V+L +L DG + +    ++   VP WF  L  FE I    
Sbjct: 61  DIVGAETLINVIFEGGYYQQVKLTWLVDGKQQVWENDVKIEGVPQWFIDLGFFETIKRES 120

Query: 121 VVTSGWMQLAEVEIVSHPGAAYAQLWK----ALIRLSIAFLAILVIGMFAVAFILKRSLR 176
            +TSGW+QLA +EI +HPG  Y +LW+    A+I +SI FL  +++  F + +I    LR
Sbjct: 121 TITSGWIQLANLEITAHPGFGYNELWRTLTNAIIVISILFLLAIMLARFGLTWI----LR 176

Query: 177 PLQLIVNKMEQVANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRER 236
           PL  I     ++A  +FG  +  P T +L  VV+  N MS Q+++ F +  +E  +LR++
Sbjct: 177 PLHEIAEHAAEIAQRKFGPDMAIPKTSELKSVVEAFNSMSHQLKQIFSSLDEEVTELRKK 236

Query: 237 AYLDPVSHLGNRAYYMSQLSGWLSESGIGGVAILQAEFIKELYEEKGYEAGDGMVRELAD 296
             +D VS L NR Y M +L+ WLSE   G + + + ++++E++ + GY+  D  +R L++
Sbjct: 237 NLVDQVSKLPNRQYMMGRLNSWLSEPNNGSLMMAKFDWLEEVHSKYGYQVRDETIRLLSE 296

Query: 297 RLKNSI-TIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAKANL 355
           +++  +  I    IARI+ YEF  ++ + ++ +      ++I  V+              
Sbjct: 297 KMQEQLDEIAPSVIARIAAYEFAFLITSAEQEQSSKYLHTLIRTVNQEISKAGCKPNEQF 356

Query: 356 SLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEEAI 415
           ++G+       + + +L+  DNAL KA ++ ++ + F S+  +K +  ++QW+  +  AI
Sbjct: 357 AIGIAQRTDNMTVSDILAQTDNALQKAIADNKVFHWFESN--EKQLYTREQWREHLSAAI 414

Query: 416 HNDWFTFRYQAA-NSSWGKTFHREVFSAFEKDGVRYTANQFLFALEQLNASHIFDQYVIE 474
            +  F F++Q   +++  +   RE++           A QF+  +E L+   + D+ +IE
Sbjct: 415 SSKQFQFKWQPVYHTNKDEVVQRELYCQLTIGDKEIHAGQFMPYVELLSLGSMLDRCLIE 474

Query: 475 RVIQQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEIPEGCFVNEP 534
            ++         +P+AIN+   S+S  +F +W+++ L ++  +A  + F+IPE    ++P
Sbjct: 475 TIVDNGLLERNYEPIAINLTFNSLSDTTFHQWLNKFL-RNTPLAQRIVFDIPEAGVYSDP 533

Query: 535 HYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTHHLDDERQKFTLT 594
                 CN +R+ GA FG+D++GR F S+ Y+   RP YVKLD  F ++ ++E       
Sbjct: 534 DACQALCNIIRDNGAHFGIDHFGRQFGSMSYLQNLRPSYVKLDQSFAYYDENEHNSELCR 593

Query: 595 SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFI 633
           ++   A  L I  I + ++ Q QL          + G+I
Sbjct: 594 ALVNVARGLDIQIIVTGIQEQPQLARFEPLKANAYMGYI 632