Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 663 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  103 bits (257), Expect = 2e-26
 Identities = 98/426 (23%), Positives = 180/426 (42%), Gaps = 28/426 (6%)

Query: 232 QLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIG-----GVAILQAEFIKELYEEKGYEA 286
           Q++ +A+ DP++ L NRA  + ++   L  +  G      VA L  +  K + +  G  A
Sbjct: 228 QMKHQAWHDPLTGLPNRALCLDRIDRSLHRARRGVDNVCAVAFLDLDRFKVVNDSMGNSA 287

Query: 287 GDGMVRELADRL-KNSITIKDISIARISTYEFGIIMPNM-DETELKIVAESIITCVDDIN 344
           GD ++RE+A RL +N+ TI  +S  R+ + EF +++  +  E E  I  + I T ++   
Sbjct: 288 GDQVLREVARRLAENTRTIDTVS--RLGSDEFILLLDEVRSEEEALITVQRICTSLEPPL 345

Query: 345 PDPTGMAKANLSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGK 404
                  + + S+GVV N+   +   +L   + A+   K +             +  +  
Sbjct: 346 EVAGRQIRISASVGVVMNRGGGNADEMLRNANIAMHHVKEHGGDGMAVFQPSMLEQAMNL 405

Query: 405 QQWKTLVEEAIHNDWFTFRYQAANSSWGKTFHREVFSAFEK-------DGVRYTANQFLF 457
            Q +  +  A+ N+ F   YQ   S      H    + FE        D      ++F+ 
Sbjct: 406 MQLEIDLHRALDNNEFFLVYQPIMS-----LHDRRLTGFEALVRWNHPDRGIVGPSEFIP 460

Query: 458 ALEQLNASHIFDQYVIERVIQQLEKGELTDP------LAINIAQGSISQPSFIRWISQTL 511
             E     H    +V+    + L       P      + +N++   +SQP  +  ++  L
Sbjct: 461 VSESTGQIHQVGHWVLAEACRALAAWREQQPSMRSVIMHVNLSARQLSQPGLVEQVAAVL 520

Query: 512 SKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRP 571
            +    A  L  E+ E   +  P Y  L    ++  G    +D++G  + SL Y+ +F  
Sbjct: 521 RETGLPARCLKLEVTETMLMENPDYANLVLRRLKEIGVRLCIDDFGTGYSSLSYLQQFPI 580

Query: 572 KYVKLDYLFTHHLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQ 630
             +K+D  F   +  E   F +  ++   AH+LG+  +A  VE + Q   LSE   E  Q
Sbjct: 581 DTLKVDQSFVARMCREPGHFKIVQAVVALAHSLGLDVVAEGVEEEEQRIMLSELSCEGGQ 640

Query: 631 GFIVDK 636
           G++  +
Sbjct: 641 GYLFSR 646