Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 88.6 bits (218), Expect = 7e-22
 Identities = 99/424 (23%), Positives = 177/424 (41%), Gaps = 25/424 (5%)

Query: 232 QLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGG-----VAILQAEFIKELYEEKGYEA 286
           QLR +A+ DP++ L NRA  + +L   L     G      V  L  +  K + +  G  A
Sbjct: 146 QLRHQAWHDPLTGLPNRALCLDRLDRALGRLARGNGELCAVVFLDLDRFKLVNDTLGNAA 205

Query: 287 GDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPD 346
           GD ++RE A RL  +    D +++R+ + EF I++ ++   +    A + +  + +    
Sbjct: 206 GDRVLRETARRLGTATRSTD-TVSRLGSDEFIILIEDLRGED---EARATLGRLREAQRA 261

Query: 347 PTGMAKANL----SLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIIL 402
           P  +   +L    S+GVV   R  +   +L   + A+  AK +      F  +   +  L
Sbjct: 262 PFDIDGRHLRVTASMGVVL-ARGGNADEVLRNANIAMHHAKEHGGDAASFFHASMLEEAL 320

Query: 403 GKQQWKTLVEEAIHNDWFTFRYQAANSSWGKT---FHREVFSAFEKDGVRYTANQFLFAL 459
              Q +  +  A+ ND F   YQ   S   +    F   +     + GV    + F+   
Sbjct: 321 DLMQLEIDLHRALENDEFFLVYQPIVSVVDRRITGFEALLRWRHPERGV-VGPDAFIALA 379

Query: 460 EQLNASHIFDQYVIERVIQQLEKGELTDPLA------INIAQGSISQPSFIRWISQTLSK 513
           E     H+  +  ++   + L K    D L       +N++   +SQ   +  +++ L  
Sbjct: 380 EHSGLIHLLGRKALDEACRTLAKWRRVDQLFDGLTMHVNLSARQLSQTHIVEQVAEALRD 439

Query: 514 HLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKY 573
                +LL  E+ E   +  P Y       +R+ G    VD++G  + SL Y+  F    
Sbjct: 440 SCLPPHLLKLEVTETMLMENPDYANAVLCRLRDIGVGVCVDDFGTGYSSLSYLQRFPIDT 499

Query: 574 VKLDYLFTHHLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGF 632
           +K+D  F   +  E  +F +  ++   AH+LG+  +A  VE + Q   L        QGF
Sbjct: 500 LKVDRSFVSRMTREPGQFKIVQAVIALAHSLGLEVVAEGVEDEEQRIMLLGLACRYAQGF 559

Query: 633 IVDK 636
           +  K
Sbjct: 560 LFAK 563