Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  116 bits (291), Expect = 5e-30
 Identities = 99/412 (24%), Positives = 190/412 (46%), Gaps = 13/412 (3%)

Query: 237  AYLDPVSHLGNRAYYMSQLSGWLSESGIG----GVAILQAEFIKELYEEKGYEAGDGMVR 292
            A+ D ++ L NR    S+L     E+ I      V  +  +  K + +  G+  GD ++ 
Sbjct: 803  AHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLL 862

Query: 293  ELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAK 352
            E+A RLKN +   DI +AR+   EF +++ + D   +  VAE++ + ++           
Sbjct: 863  EVARRLKNIMGNDDI-VARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLH 921

Query: 353  ANLSLGV-VSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLV 411
            ++ S+G+ +      S   L+   D A+ +AK+    NY F ++  + ++  +QQ +T +
Sbjct: 922  SSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGL 981

Query: 412  EEAIHNDWFTFRYQA-ANSSWGKTFHREVFSAFEKDGVRYTA-NQFLFALEQLNASHIFD 469
             +AI  +     YQ   + S G+    E    ++   +   A ++F+   E+++      
Sbjct: 982  RQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIG 1041

Query: 470  QYVIERVIQQL----EKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEI 525
            Q+V+E  + QL    +KG     +A+N++   + + + +  I   L+KH      L  EI
Sbjct: 1042 QWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEI 1101

Query: 526  PEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTHHLD 585
             E   +  P   A     +R  G +  +D++G  + SL Y+       +KLD  F   ++
Sbjct: 1102 TESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIE 1161

Query: 586  DERQKFTLTSIS-RTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFIVDK 636
             +     +++ +   AH LG+T +A  VE + QL  LS    ++ QG+   K
Sbjct: 1162 SDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSK 1213