Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella sp. ANA-3

 Score =  126 bits (317), Expect = 3e-33
 Identities = 100/424 (23%), Positives = 196/424 (46%), Gaps = 9/424 (2%)

Query: 218 QVEKAFKAQAKEAQQLRERAYLDPVSHLGNRAYYMSQLSGWLSES--GIGGVAILQAEFI 275
           Q++       +E Q+L + AY DPV+  G+R  + ++L    + S   +G +A+++A  +
Sbjct: 201 QLKSKLDLLTQENQKLHKAAYQDPVTGFGSRPPFTTKLESISNRSIPQLGLLAMVKATEL 260

Query: 276 KELYEEKGYEAGDGMVRELADRLKNSIT-IKDISIARISTYEFGIIMPNMDETELKIVAE 334
             + + +G  AGD  +  +A+ ++ + +   D    R+S+ +F I +P++   +     E
Sbjct: 261 SHVNQLQGRSAGDDYLASVANCIRKACSKYPDSECYRVSSADFAIFLPDLVLKDGPKFLE 320

Query: 335 SIITCVDDINPDPTGMAKANLSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFIS 394
            +   +D+        + A++  G+V  ++ +    LLSL D A++ A++    ++    
Sbjct: 321 QLKVFLDEYQQMTRAESVAHI--GLVPYQQGTDPVNLLSLADTAVSIAQTLGPNSFHIQE 378

Query: 395 SDTDKIILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGKT-FHREVFSAFEKDGVRYTAN 453
                   G  +WK  + + I      F  Q           +RE+ + F  +  ++   
Sbjct: 379 KLNGDEQFGDDRWKVAINDLITRQALKFFQQPIQPCRNDVEVYRELLARFYNNEGKFLPT 438

Query: 454 QFLFAL-EQLNASHIFDQYVIERVIQQL-EKGELTDPLAINIAQGSISQPSFIRWISQTL 511
             + A+ E+   S   D+ V+   ++ L E   ++    +NI+  S  Q  F+ W+   L
Sbjct: 439 TTVIAMAERHGMSTELDKLVVISTLRMLKENPTISGNFGVNISAFSAHQELFVGWLRDVL 498

Query: 512 SKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRP 571
           SKH  +A+ L FEI E         +  F   V + G+   ++ +G +F S  + +E RP
Sbjct: 499 SKHKYIASRLVFEINESGMQANLGASYKFVREVHSVGSRVSIERFGMSFTSFKFFSEVRP 558

Query: 572 KYVKLDYLFTHHLD-DERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQ 630
            Y+KLD  +T  +D D   KF +  +   A  +GI  IA+ VE Q +   L +  ++  Q
Sbjct: 559 DYIKLDGSYTSSIDEDSNNKFFVRMMVDVARRIGIRVIATSVERQEEKLTLEKLLVDGLQ 618

Query: 631 GFIV 634
           G+ +
Sbjct: 619 GYYI 622