Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score = 97.4 bits (241), Expect = 2e-24
 Identities = 105/424 (24%), Positives = 183/424 (43%), Gaps = 26/424 (6%)

Query: 231 QQLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGGVAILQAEFIKELYEEKGYEAGDGM 290
           +QL++RA  D ++ L NR  +  QL  + S++    V  L  E  K + +  G+ AGD M
Sbjct: 422 RQLQKRANFDGITGLLNRQAFEEQLPQFASQAKRIAVCYLDLEQFKLINDSCGHTAGDRM 481

Query: 291 VRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKIVAE--SIITCVD-DINPDP 347
           +  +A  +++ +  + + +AR+   EFG+++   D T L +  +   II  V   +  D 
Sbjct: 482 LVLVARAIQSCLGPQTL-LARLGGDEFGLVI--CDSTALSVAQQLKQIIAQVSLQVLHDK 538

Query: 348 TGMAKANLSLGVVSNKRQSSTTTLLSLLDNA-----LAKAKSNPELNYGFISSDTDKIIL 402
               K  LS+GV   +  +     L LL +A      AKAK   ++++     D DK + 
Sbjct: 539 NCNYKVGLSIGVAFGR--APYINALELLKDADIACIAAKAKGTNQIHF---YDDKDKELT 593

Query: 403 GKQ---QWKTLVEEAIHNDWFTFRYQAANS--SWGKTFHREVFSAFEKDGVRYTAN-QFL 456
            ++   +W   + +AI  +     YQ      +  K    E+    ++   R  A  QF+
Sbjct: 594 YQRNAPKWAVRIAQAIEENELLLYYQPIRGLGASSKRQRMEILLRIQEPCGRILAPAQFI 653

Query: 457 FALEQLNASHIFDQYVIERVIQQLEKGELTDP---LAINIAQGSISQPSFIRWISQTLSK 513
            A E+       D+ VI +    L       P   ++IN++  S+     + +I+Q    
Sbjct: 654 AAAERFKLMPEIDKEVIRKAFLWLSLNPQLWPDHCISINLSGNSLGAEGMVEYIAQQQHI 713

Query: 514 HLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKY 573
               +  + FEI E   +            +R  G  F +D++G  F S  Y+ E    Y
Sbjct: 714 FDIPSQCVCFEITETTAIQNRQRGMEMLRQLRKLGFSFALDDFGSGFASYGYLRELPVDY 773

Query: 574 VKLDYLFTHHLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGF 632
           VK+D  F  +L    + + +  SI      +GI T+A  VE Q  +D L    I   QG+
Sbjct: 774 VKIDGCFVKNLAVNAKDYAIVKSIQDVCRVMGIETVAEFVENQEIIDRLQVIGINYAQGY 833

Query: 633 IVDK 636
            + +
Sbjct: 834 AIGR 837