Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella sp. ANA-3

 Score =  360 bits (925), Expect = e-104
 Identities = 201/636 (31%), Positives = 348/636 (54%), Gaps = 5/636 (0%)

Query: 1   MTLYKQLVAGMIAVFILLLISVFTIEFNTTRNSLEQQQRSEVNNTINTVGLALAPYLEKK 60
           MTL++Q+ + + ++F+L++ S+  ++F  T++ L +Q  S++NNT  ++GL L P L+  
Sbjct: 1   MTLFRQIYSLLFSLFLLVVASLGYVQFTETQSFLTKQMESDLNNTSTSLGLMLTPALQAG 60

Query: 61  DTIAVESVINALFDGSSYSIVRLIFLDDGTEILRSYPIQPNNVPAWFTQLNLFEPIHDRR 120
           DT A E+++N +F+G  Y  ++L ++ DG +   + P++  +VP WF  LNLF+ I    
Sbjct: 61  DTAAAETLVNVIFEGGYYKNIKLTWMVDGKQQEWNNPLKIEDVPQWFINLNLFKTIKKES 120

Query: 121 VVTSGWMQLAEVEIVSHPGAAYAQLWKALIRLSIAFLAILVIGMFAVAFILKRSLRPLQL 180
            +TSGW+QLA++EI +HPG  Y +LW+ +    IAF  + ++ +F     L   L+PL  
Sbjct: 121 TITSGWLQLAQLEITAHPGFGYHELWRIMSNTIIAFSLLFLVAIFTARLGLTWILKPLHA 180

Query: 181 IVNKMEQVANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRERAYLD 240
           + +  +++A  QFG  +P P T +L  +V   N MS Q+++ F++  +E   LR++   D
Sbjct: 181 LSDHAKKIAARQFGPDMPLPKTTELKDLVTAFNSMSAQLKQLFQSLDEEVGSLRKKNLTD 240

Query: 241 PVSHLGNRAYYMSQLSGWLSESGIGGVAILQAEFIKELYEEKGYEAGDGMVRELADRLKN 300
           P S L NR Y +S+L+GWLSE   G + + + ++++E++ + GY+  D  +R LA++L  
Sbjct: 241 PASGLPNRQYVVSRLNGWLSEPSSGALFLAKLDWLEEVHSKYGYQVRDETIRLLAEKLVQ 300

Query: 301 SIT-IKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAKANLSLGV 359
            +  I    IARI+ +EF  ++ +++  ++    +++I  ++            N ++GV
Sbjct: 301 QLNEITPSVIARIAAFEFAFLVTDVEHDQISKYLQTLIRTINQEISKAGCKPNENFAIGV 360

Query: 360 VSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEEAIHNDW 419
                Q   + +L+  DNAL KA    +  + F    T++ +  ++QW+  +  AI N  
Sbjct: 361 AERIGQMKVSDILAQADNALQKALKEHKSFHWF--ETTEQQLFTREQWRDNLSHAISNKK 418

Query: 420 FTFRYQAANSSWGK-TFHREVFSAFEKDGVRYTANQFLFALEQLNASHIFDQYVIERVIQ 478
           F FR+Q      G     RE++   E       A QF+  +E L+   + D+ +IE V +
Sbjct: 419 FKFRWQPIQFCNGDGVAQRELYCQLELGDKVAHAGQFMPYIELLSLGSLLDKCLIETVYE 478

Query: 479 QLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEIPEGCFVNEPHYTA 538
           Q       +PLAIN+   SIS   F  W++  L     V  +  FEIPE    ++     
Sbjct: 479 QKLLERNYEPLAINLTHQSISDTLFHDWLNHFLRSMPQVERIC-FEIPEAGVYSDLESCV 537

Query: 539 LFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTHHLDDERQKFTLTSISR 598
           L CN +R+ GA FG+D++GR F S+ Y+ E RP YVKLD  F+++ +         +I  
Sbjct: 538 LLCNIIRDNGAKFGIDHFGRQFGSMSYLQELRPSYVKLDQSFSYYDEASHNSELCRAIIN 597

Query: 599 TAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFIV 634
            A  L I  I + ++ + QL+   E   + +QGFIV
Sbjct: 598 VAKGLDIQVIVTGIQEKAQLERFDELKTDAYQGFIV 633