Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  354 bits (909), Expect = e-102
 Identities = 193/470 (41%), Positives = 288/470 (61%), Gaps = 23/470 (4%)

Query: 15  QEPLMSNRSY--NKLTAEELDYVDDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAE 72
           Q P  + RSY  +   + E +++ +   A L ++P  +R+ +W+     +  + WA  A 
Sbjct: 4   QTPDSTARSYFGSFSKSAESEFMPETAGATLQDSPRRSRVTVWLAAVLIVTGLVWAKLAV 63

Query: 73  IDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQKGQQLILLDDTRFRSDFRER 132
           + +VT G+GK +PSS++QVIQNLEGG+V +I VREG+ V KG  L+ LDDTR++S+  E 
Sbjct: 64  LQEVTTGEGKAIPSSKIQVIQNLEGGIVTEIFVREGQMVNKGDTLLRLDDTRYQSNKGES 123

Query: 133 EQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQ 192
           E     LTA V +LSA       + + E                    +    P + E +
Sbjct: 124 EADRYALTAQVERLSAEAEGRPFNLSAE--------------------VIAKAPQVAEDE 163

Query: 193 RDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEG 252
           R  Y Q    L ++   L++Q++QK Q+L E  ++      +    ++E++++ PL   G
Sbjct: 164 RSLYEQRQRRLASEQRTLTEQLRQKTQELAEFRSKQGQFSSALALLQEEMNMSAPLVRTG 223

Query: 253 VVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQA 312
            V  +E+L+L+R   + R  L +T L IP  +SA+ E       + Q FR+E    LN+ 
Sbjct: 224 AVSPVEILRLKRSAVEIRGSLNATTLAIPRAESAINEIKSKIDESEQTFRSEAAKDLNEK 283

Query: 313 QDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLL 372
           + +LS +T S++ ++D+V RT VVSPV G +K L VNT+GGV+QPG +++EIVP ED LL
Sbjct: 284 RTELSKITASSIAIDDRVTRTTVVSPVHGVIKQLKVNTIGGVVQPGNDMVEIVPLEDNLL 343

Query: 373 VEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADTTQDEEGNSFYLVRVR 432
           +EA++ PQD+ FL P   A+VKFSAYD+T YGGL   LE I ADT  D++GNSFYL++VR
Sbjct: 344 IEAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLELIGADTITDDKGNSFYLIQVR 403

Query: 433 TKETTLGHD-QNLPIIPGMTASVDIITGKRTVLDYLLKPILSAQSNALRE 481
           T +  LG D + L IIPGM A+VDIITG+++VLDYLLKP+L A++ A+RE
Sbjct: 404 TDKNHLGGDAKPLLIIPGMVATVDIITGEKSVLDYLLKPVLKARTEAMRE 453