Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Multidrug resistance protein A from Pseudomonas fluorescens FW300-N1B4

 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 16/140 (11%)

Query: 330 VNRTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDL 389
           ++ TVV +PV G +    V  VG  + PG+++++IVP  D  +V A      +  +RP  
Sbjct: 229 LDSTVVHAPVDGVIGNRQVR-VGRFVTPGVSLLDIVPVNDVWVV-ANFKETQLEHIRPGQ 286

Query: 390 PAIVKFSAYDFTRYGGLEGTLEHISADT--------TQDEEGNSFYLVRVRTKETTLGHD 441
              +    Y     G LEG ++  +  +        T +  GN   +V+    +  L H+
Sbjct: 287 RVRITVDGYP---DGALEGVVDSFAPGSGSAFSLLPTDNATGNFVRVVQRVPVKIRLAHN 343

Query: 442 QNLP--IIPGMTASVDIITG 459
             LP  I+PG++A V++  G
Sbjct: 344 P-LPGRIVPGLSARVEVAQG 362