Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., type I secretion membrane fusion protein (HlyD family) from Azospirillum brasilense Sp245

 Score =  160 bits (406), Expect = 7e-44
 Identities = 120/443 (27%), Positives = 204/443 (46%), Gaps = 20/443 (4%)

Query: 46  TPHSARIILWVMVAFFILAIA------WASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGL 99
           TPH   +    +     +AI       WA  A +D   +  G ++  S  + + +LEGG+
Sbjct: 27  TPHEPTLRGTALAGALAVAIGFGSFFGWAFTASLDSAAIAPGTIMVESHRKTVSHLEGGI 86

Query: 100 VKQILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENF 159
           + ++LV++G+ V  GQ L+ LD T+  +   +   Q     A + +L A  +        
Sbjct: 87  LSELLVKDGDMVTAGQVLLRLDTTQSGAVVAQLHGQYWTSLARLARLRAEQTDAKAPVYA 146

Query: 160 EEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQ 219
           +E   A       S +A   + ++ +  L E +RD Y         Q+S+  ++I Q + 
Sbjct: 147 DELVAAAKT----SSVAAEALAAEQR--LFESRRDAYE-------GQISIQRKRIGQLRD 193

Query: 220 DLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELK 279
           +L+  +++ +       Y + EL I E L  +G   K  +L+LQR + DT+  L   +  
Sbjct: 194 ELVALDSQRVAANDRLRYTQDELRIVETLLAKGYERKPRMLELQRNVADTKGRLGEIQAD 253

Query: 280 IPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPV 339
               +  +  A L  IN     R+E  ++L   Q  +S L+E      D + R  +VSP 
Sbjct: 254 KSKAEQGIAAAELEIINLGNNRRSEVGNELQTIQATVSDLSERLRSAGDVLKRQELVSPQ 313

Query: 340 TGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYD 399
            G V  L   T GGVI  G  I++IVP +D L+VEA++AP D+  +     ++V+   Y 
Sbjct: 314 AGRVTNLRFYTPGGVIPAGQGILDIVPQDDGLIVEARVAPADVQNIDVGGSSMVRLVGYR 373

Query: 400 FTRYGGLEGTLEHISADTTQDEE-GNSFYLVRVRTKETTLGHDQNLPIIPGMTASVDIIT 458
                 ++G +  +SAD  +DE  G +++L R+      L    N+ + PGM   V I  
Sbjct: 374 QRLVPPVQGKVLTLSADQLEDERTGQAYFLARISLDAAALKALPNVDLHPGMPTEVMIHG 433

Query: 459 GKRTVLDYLLKPILSAQSNALRE 481
             R  ++Y L P+    + A RE
Sbjct: 434 HTRKAIEYFLTPLTDGMNRAFRE 456