Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., Type I secretion membrane fusion protein, HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  187 bits (474), Expect = 8e-52
 Identities = 134/426 (31%), Positives = 217/426 (50%), Gaps = 28/426 (6%)

Query: 51  RIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQ 110
           RI + +++  F L   WA+ A +D    G G V+  S  + +Q+LEGG+VK++LVR+G+ 
Sbjct: 25  RIGVTIVLVTFGLFGTWAALAPLDNAVYGSGLVMVQSYRKTVQHLEGGIVKELLVRDGDT 84

Query: 111 VQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSA------SISSVIIDENFEEKNW 164
           V KG  LI+LDD++ RS +     Q+ +  A   +L A      SI  + I         
Sbjct: 85  VHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPLTI-------TG 137

Query: 165 ANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEA 224
            +SV+   +      V S  +   +     Q R+ +  L+ Q+S L   I+ K       
Sbjct: 138 TDSVRAKEAIAGEQQVFSTRKNSRLTEISVQ-RERIGQLKQQISGLRDMIRTK------- 189

Query: 225 EARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLK 284
               ++L +SY     E+   + L ++G V K  LL+ +R+L+  + E+   E  I   +
Sbjct: 190 ----VSLEKSY---SSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQ 242

Query: 285 SAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVK 344
             + E  L  I   + F ++   +L+  Q K+  L E+A  L+D+++R V+ +P  G V 
Sbjct: 243 LQISETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETANALQDRLSRVVIRAPEDGMVL 302

Query: 345 TLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYG 404
            + V+TVGGV+  G  +++IVP    L+VEA +A  DI  +       V FSA++     
Sbjct: 303 DMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVHFSAFNSATTP 362

Query: 405 GLEGTLEHISADTTQDEEGNSFYLVRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTVL 464
            +EG +  ISAD  +D+ G  +YLVRV+  E  +    +  + PGM A V I  G+RT+L
Sbjct: 363 VIEGEVTRISADRLKDDAGEPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINAGERTML 422

Query: 465 DYLLKP 470
            YLLKP
Sbjct: 423 QYLLKP 428