Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., hemolysin secretion protein-like from Synechococcus elongatus PCC 7942

 Score =  121 bits (304), Expect = 4e-32
 Identities = 104/438 (23%), Positives = 197/438 (44%), Gaps = 43/438 (9%)

Query: 50  ARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGE 109
           +R+ +W +V     A AWA  A+ID+    QG++ P + V+ +Q   GG+++++ V+EG+
Sbjct: 37  SRLTIWTLVGVTASATAWACIAQIDEAVQVQGQLEPKAAVKDVQAPVGGVLERLEVKEGQ 96

Query: 110 QVQKGQQLILLDDT----RFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWA 165
           +V +GQ L   + T    R RS    RE+ VA       Q+  S    +           
Sbjct: 97  RVTQGQILARFNATTVAERIRSLTEIRERLVAENQTFRAQIGESSEGSV----------- 145

Query: 166 NSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAE 225
                           S +Q   +E  R ++    +  R + S    Q+KQ+Q   ++ E
Sbjct: 146 ----------------SVNQQQRIEAARREFESRQEAARLEAS----QLKQQQ---LQVE 182

Query: 226 ARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKS 285
           + +  +R S D  ++ L+   PL  EG + + + LK +  ++     L   + ++  L+ 
Sbjct: 183 SELQQVRYSLDLNQRILNDLRPLYEEGGIARTQYLKQEETVSQLESTLRKNQAELQRLQF 242

Query: 286 AVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKT 345
           AV +A     N      +E + ++ +   +++ +       +  +   +V +P +GTV  
Sbjct: 243 AVSQAEARLTNTQTVTFSEARGRIEENARRIAEIDSQITEAKQTLKYQIVRAPQSGTVFD 302

Query: 346 LYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGG 405
           +     G V      ++++VP +D L+    I  +DI F+R      ++  +Y F+ YG 
Sbjct: 303 ITAQGPGYVANTSEPLMKLVP-DDELVARLYIPNKDIGFVRTGQDVDIRIDSYPFSEYGD 361

Query: 406 LEGTLEHISADTTQDEEGNSF--YLVRVRTKETTL-GHDQNLPIIPGMTASVDIITGKRT 462
           L+G L  + +D+    +   +  +   V  +E  L    + LPI  GM+ S  I   +R 
Sbjct: 362 LKGKLTRVGSDSLPPNDTYQYVRFPAEVTLQEQKLVSRGRELPIQSGMSVSASIRLRQRP 421

Query: 463 VLDYLLKPILSAQSNALR 480
           V+  LL  + S  S+AL+
Sbjct: 422 VIT-LLSDLFSRSSDALK 438