Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  155 bits (391), Expect = 4e-42
 Identities = 123/448 (27%), Positives = 213/448 (47%), Gaps = 32/448 (7%)

Query: 47  PHSARIILWVMVAFFILAIA----WASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQ 102
           P S R+   + +A   ++      WA  A +    + QG  V +   +++Q+LEGG++++
Sbjct: 21  PRSIRLHTLLGLALIAISFGGFGYWAFAAPLAAAIIAQGSFVANGNNKIVQHLEGGIIEE 80

Query: 103 ILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEK 162
           +LV EG++V+ G  L+ LD T  R++ R    +   L A V +L A      + E+    
Sbjct: 81  LLVAEGDKVKAGDILVKLDQTVARANARMLNLKRLRLEAVVGRLRAEA----VGED---- 132

Query: 163 NWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLI 222
             A SV    ++ A  P +      ++E Q   ++     LR+QL+++ Q I+      +
Sbjct: 133 --AFSVPQIVARQADDPDVRA----IMESQNVNFQSKKIKLRDQLNLIDQNIRS-----L 181

Query: 223 EAEARIINLRQS-----YDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTE 277
           E  AR   L+Q+      +   +E +    LA++G++ + EL+ L R + D   E+   E
Sbjct: 182 EFRARGYALQQASFNRQLEILNEEREAKSKLADKGLIRRPELMALDRAIADAIGEIGRLE 241

Query: 278 LKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVS 337
            ++    + +       + A    +    D L  A+  L  + E      + + R  + S
Sbjct: 242 SEVKESYTQIDRYRQEAVIAVNTNKQAALDGLEAAEADLDGVREQVREASEVLGRATIRS 301

Query: 338 PVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSA 397
           PV GTV   Y +T GGVI  G  I+EI+P    L++EAQ+    I  L+    A ++ SA
Sbjct: 302 PVDGTVVRSYFHTAGGVIASGKPIMEILPANVPLIIEAQLLRTAIDQLKVGEDATIRLSA 361

Query: 398 YDFTRYGGLEGTLEHISADTTQDE----EGNSFYLVRVRTKETTLGHDQNLPIIPGMTAS 453
            +      L+G + ++SAD+ ++E    +    Y+VRV    + +G       +PGM A 
Sbjct: 362 LNRRTTPVLKGKVFYVSADSIEEEVAGGQQRDVYIVRVEVPASEIGRIHGFHPVPGMPAE 421

Query: 454 VDIITGKRTVLDYLLKPILSAQSNALRE 481
           V I T +RT  +YL KPI  + S A +E
Sbjct: 422 VLITTSERTFFEYLTKPITDSMSRAFKE 449