Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., toxin secretion transmembrane protein from Sinorhizobium meliloti 1021

 Score =  166 bits (420), Expect = 1e-45
 Identities = 113/435 (25%), Positives = 210/435 (48%), Gaps = 10/435 (2%)

Query: 49  SARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREG 108
           + R+  WV+++  +       W +I+ V  GQGKV+P S+VQ++Q    G + +ILV EG
Sbjct: 13  TVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRIIRILVTEG 72

Query: 109 EQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSV 168
           + V+ G  L+ +D     S  + R  +V        +  A+++ VII         AN  
Sbjct: 73  QPVKAGDLLVGMDTVSVESQIKLRLTEVRRQ-----RRGATVARVIIAA-LTNVAVANDD 126

Query: 169 QLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARI 228
            L   + AF     D +  +++         L +LR+Q++ ++ Q+ + +Q  I  +AR+
Sbjct: 127 VLAAGRAAFERERHDLE--VIDGAEALIEAVLTSLRDQVARINAQLDRVEQSRITQQARL 184

Query: 229 INLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVR 288
              R   D + ++      L ++G + +++  +  R+      E+  +E ++ +L +   
Sbjct: 185 QKARSDLDISSRKFLSAGKLKDKGAISEVDYFERLREQRARELEVLISESELNILAAEAN 244

Query: 289 EAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYV 348
                R +         Q +LN+A   L+ L        +++    + +P  G V+ L V
Sbjct: 245 ALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQLALLAIRAPADGKVENLTV 304

Query: 349 NTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEG 408
            T+GG ++ G  ++ IVP+ D + +EA    +DI FL     A VKF A+   R+G + G
Sbjct: 305 FTIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLAKGQEAFVKFDAFPAERFGIVRG 364

Query: 409 TLEHISADTTQD-EEGNSFYLVRVRTKETTLG-HDQNLPIIPGMTASVDIITGKRTVLDY 466
            +  + AD   D   G   Y + +   + T+G   +++   PGMTA++D+ITG+R ++ Y
Sbjct: 365 RVTRVGADARGDIVPGKWVYAIHLVLDQETIGIGGRDIGFSPGMTATIDVITGERRLISY 424

Query: 467 LLKPILSAQSNALRE 481
             +PI+ A  + L E
Sbjct: 425 FFEPIIKAIQDGLGE 439