Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., HlyD family protein secretion protein from Sinorhizobium meliloti 1021

 Score =  155 bits (393), Expect = 2e-42
 Identities = 121/450 (26%), Positives = 214/450 (47%), Gaps = 36/450 (8%)

Query: 47  PHSARIILWVMVAFFILAIA-------WASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGL 99
           P + R +   ++   +LA+A       WA+  E+    V  G V+    V+ +Q+L GG+
Sbjct: 10  PTARRSLSRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGI 69

Query: 100 VKQILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENF 159
           V ++LV+EG++V+ GQ LI LD T  R++    E  +A   A   +L A           
Sbjct: 70  VGELLVKEGDRVEAGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQA----------- 118

Query: 160 EEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQY---RQDLDNLRNQLSVLSQQIKQ 216
            E+  A S +++     F P  + ++  L+E ++  +   R  L  ++ QL     Q+  
Sbjct: 119 -ERMGAASFEIEEDLAEFIPGTAAAK--LIEGEQRLFASRRSALSGMKGQLDSRKAQLAD 175

Query: 217 KQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTST 276
           + + L     ++  + ++     +EL   + L  +G+VP   +  L+RQ    R EL   
Sbjct: 176 EVEGLT---VQLNAIEEALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQ----RAELEGG 228

Query: 277 ELKIPVLKSAVR----EAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNR 332
             +    ++  R    E  L  +   +  R+E   +L   + K++   E      D++ R
Sbjct: 229 RGRHIAARAQARGKSSEIDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRR 288

Query: 333 TVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAI 392
             + +P++G +  L ++TV GVI PG  ++ +VP  + L VEA++A  DI  +R      
Sbjct: 289 LDITAPLSGRIYQLAIHTVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVE 348

Query: 393 VKFSAYDFTRYGGLEGTLEHISADTTQDEE-GNSFYLVRVRTKETTLGHDQNLPIIPGMT 451
           ++FSA++      +E  +  ++ D   DE  G S+Y +R+R K  +L   + L + PGM 
Sbjct: 349 IRFSAFNQRTTPEVEAEVVTVAPDLVTDERTGASYYPLRIRPKAESLAKLKGLSLYPGMP 408

Query: 452 ASVDIITGKRTVLDYLLKPILSAQSNALRE 481
           A V I    RTV+ YL KP+     +A RE
Sbjct: 409 AEVFIKIADRTVISYLTKPLTDQMRHAFRE 438