Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., HlyD family protein secretion protein from Sinorhizobium meliloti 1021

 Score =  147 bits (370), Expect = 1e-39
 Identities = 99/422 (23%), Positives = 207/422 (49%), Gaps = 29/422 (6%)

Query: 67  WASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQKGQQLILLDDTRFR 126
           WA   E+   +V  G +V  S+ + + + EGG++ +ILV+EG+ V  GQ L+ L+DTR R
Sbjct: 73  WAFSTELSSASVTSGTIVVDSKRKTVSHFEGGVLGRILVQEGDHVAPGQPLMKLEDTRAR 132

Query: 127 SDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDYSKLAFPPVL---SD 183
           SD +  + +   L A + +L A  + +                     ++FP  L    +
Sbjct: 133 SDLQALQSRRVGLIAKLARLRAERAGL-------------------HAVSFPADLVSEGE 173

Query: 184 SQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARIINLRQSYDYAKKELD 243
           +  D V  ++  + +  +   ++L++  + I++  +      A++    +  +   ++  
Sbjct: 174 AAADAVTAEKAFFEKRSEAKESRLAIQRKTIEEYSEKAKSLTAQLQATDRQIELMNEQRT 233

Query: 244 ITEPLANEGVVPKIELLKLQRQLND---TRRELTSTELKIPVLKSAVREAMLSRINAAQK 300
               L  +    + +L+++  +L++   TR EL   + +    + A+  A L+ I     
Sbjct: 234 AIATLVEKAFAQRSKLIEIDARLSELAATRGELAGDKAQA---EKAMAGAELALIGIESD 290

Query: 301 FRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMN 360
           F++E   ++  A+ +L+ + +     ED + R  + +P  G V  + + T G  + PG  
Sbjct: 291 FQSEIAGEITTARLELAEVEQRITAAEDVLRRLEIRAPQAGIVANIQLRTPGSAVTPGQP 350

Query: 361 IIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADTTQD 420
           +++IVP ++ LLVE  ++ +DI  +       ++ +AY+   +  LEG + +I+AD + D
Sbjct: 351 LLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRLTAYNQRSHLPLEGKVTYIAADQSVD 410

Query: 421 EEGN-SFYLVRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTVLDYLLKPILSAQSNAL 479
           E+ N ++++ R      +L  + ++ + PGM A V I+   R+ +DYL+ P+  + + A 
Sbjct: 411 EKSNVAYFVARAEVTPESLAANPDIRLYPGMPAEVLIVHKSRSAIDYLVAPVSDSFNRAF 470

Query: 480 RE 481
           RE
Sbjct: 471 RE 472