Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., protein secretion protein from Sinorhizobium meliloti 1021

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 32/265 (12%)

Query: 213 QIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRE 272
           ++ Q   ++  AEAR+ N+    + A +   I +  A    V  +  L L  +  D RRE
Sbjct: 106 KLAQAVANVEAAEARLTNV--DAEMALQHALIRQAEAQRRSV--VAELNLAAKAYDRRRE 161

Query: 273 L----TSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESA----- 323
           L    T ++  +    +A   A  + + A+     +QQ     A  + +++   A     
Sbjct: 162 LIRSETISQAHVDESDAAKSRAEANVLAASATVEAQQQRIAVLAAQREAAVAAVAQAEAA 221

Query: 324 ---VGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQ 380
               G++  +  TVV +PV G +    V  VG ++ PG ++++IVP ++  +V A     
Sbjct: 222 RDLAGID--LESTVVRAPVGGVIGNRQVR-VGRLVAPGASLLDIVPLDNVWIV-ANFKET 277

Query: 381 DIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADT--------TQDEEGNSFYLV-RV 431
            +  +RP   A +    Y   + G LEG ++  +  +          +  GN   +V RV
Sbjct: 278 QLEHIRPGQRASITIDGY---KSGALEGVVDSFAPGSGSAFSLLPADNATGNFVRVVQRV 334

Query: 432 RTKETTLGHDQNLPIIPGMTASVDI 456
             K    G+  +  ++PG++A V+I
Sbjct: 335 PVKIRFAGNPLSGRLLPGLSARVEI 359