Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., putative type I secretion membrane fusion protein from Phaeobacter inhibens DSM 17395

 Score =  173 bits (439), Expect = 1e-47
 Identities = 123/435 (28%), Positives = 205/435 (47%), Gaps = 17/435 (3%)

Query: 51  RIILWVMVAFFIL---AIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVRE 107
           ++++W++V  F L    + WA+ AE+    V  G+   +     +Q+LEGG+V++I V E
Sbjct: 43  QLVMWMLVCGFGLFGGLVFWATKAEMTSAVVAPGQFTVAGDRLSVQHLEGGIVREINVAE 102

Query: 108 GEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANS 167
           G+ V +G  + +LD  R R+       Q+A+L A   +L A ++        E       
Sbjct: 103 GDMVAEGDVIAVLDGRRMRASRAILTSQMASLLAQQARLQAELA--------EADQIEVP 154

Query: 168 VQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEAR 227
            +LD      P ++S     L E QRD +  +      Q+ +L  +I Q  + L   +AR
Sbjct: 155 AELDQLIAEDPQLVS-----LFEVQRDVFTSNRALYEGQVQILRDRISQLGKQLNGRQAR 209

Query: 228 IINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAV 287
           I  +       K E+     L  +G+VPK  L   Q Q         + E     L+  +
Sbjct: 210 ITAIEDQLTLIKGEVADLHKLYEKGLVPKTRLSDRQLQHTGLMGTFGALESDSENLQERI 269

Query: 288 REAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLY 347
            E     +   +        +    Q+++  L +     ED + R  +++P  G V  L 
Sbjct: 270 AETEERILQVHRDTVNRISSETQLVQERILDLRQRLDAAEDVLERQTILAPRAGRVVELS 329

Query: 348 VNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLE 407
           +NT+G V+ PG N++E+VP+   L+VE +++P DI  +     A V+ +AY F     + 
Sbjct: 330 INTLGQVLNPGQNVLELVPSGSDLIVETRVSPTDIDEVVTGGQARVQLTAYSFRSTPPVR 389

Query: 408 GTLEHISADTTQD-EEGNSFYLVRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTVLDY 466
           G +  ++AD+  D   G  +Y V +R     L    N+  +PGM A   I TG++T+ DY
Sbjct: 390 GEVVMVAADSIADLNSGIPYYRVHIRIPPEELAALPNVKTLPGMPAQAMIETGRQTLADY 449

Query: 467 LLKPILSAQSNALRE 481
           LL P+L + SNALRE
Sbjct: 450 LLSPVLRSMSNALRE 464