Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., putative HlyD family secretion protein from Phaeobacter inhibens DSM 17395

 Score =  137 bits (344), Expect = 1e-36
 Identities = 120/451 (26%), Positives = 211/451 (46%), Gaps = 36/451 (7%)

Query: 45  NTPHSARIILWVMVAFFILAIAWASWA---EIDKVTVGQGKVVPSSQVQVIQNLEGGLVK 101
           N+  + R ++  ++   IL   + +W+    I    V  G++      QV+Q+L+GG+V+
Sbjct: 9   NSWSARRPLIIGLIGVIILLGGFGTWSVATSIAGAVVASGRIEVDRNRQVVQHLDGGIVQ 68

Query: 102 QILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEE 161
           +ILV EG+ V +G  L+ LD    RS     E Q+  L A   +L A            E
Sbjct: 69  EILVEEGDTVAEGAVLLRLDAKELRSQLVITEGQLFELMARRARLDA------------E 116

Query: 162 KNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYR---QDLDNLRNQLSVLSQQIKQKQ 218
           ++ A +V+ D         LS+++P++ +  + Q R      D++  ++  L ++  Q Q
Sbjct: 117 RDSAETVEFDTELHD----LSETRPEVADLMQGQVRLFEARKDSVAREIDQLEKRRTQIQ 172

Query: 219 QDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQR---QLNDTRRELTS 275
             +I   A+  + R   D  ++EL   + L + G+     +L L+R    L  +  EL +
Sbjct: 173 DQIIGVRAQQASRRTQLDLIEEELTNQQSLLDRGLAQAGTVLNLRRTEADLQGSLGELIA 232

Query: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335
           TE +    +  + E  +  +    + R E   +L   + +   L E+   L+D++ R  +
Sbjct: 233 TEAQA---EGRITEIDIEILKLGTQQREEAITRLRDLRYQELELAETRRALKDRLARLDI 289

Query: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKF 395
            +PV+G V  L V+T   VI+    ++ +VP +  L++ AQ+AP D+  +       ++F
Sbjct: 290 TAPVSGIVYGLQVHTPRSVIRAADPVLYLVPQDRPLVIAAQVAPTDVDQIFVGQAVTLRF 349

Query: 396 SAYDFTRYGGLEGTLEHISADTTQDEEGN-SFYLVRVRTKETTLGHDQNLP----IIPGM 450
            A D      L G+++ ISAD  +D+    S+Y   +   E   G  + LP    +IPGM
Sbjct: 350 PALDQRSTPELFGSVKQISADAFEDQASKLSYYRTEI---ELNPGQLETLPEGTVLIPGM 406

Query: 451 TASVDIITGKRTVLDYLLKPILSAQSNALRE 481
                I T  RT L YL+KP+      A RE
Sbjct: 407 PVEGYIRTADRTPLGYLVKPLADYFVRAFRE 437