Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., type I secretion membrane fusion protein, HlyD family from Dechlorosoma suillum PS

 Score =  153 bits (387), Expect = 1e-41
 Identities = 118/449 (26%), Positives = 211/449 (46%), Gaps = 25/449 (5%)

Query: 41  ALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLV 100
           AL  +T    RI +W +   F   + WA+ A +D+    QG V   ++ + IQ+L GG +
Sbjct: 37  ALPTDTERPLRIGIWGLAIGFGGLLLWATLAPLDEGVPTQGVVSIDTKRKTIQHLLGGRI 96

Query: 101 KQILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFE 160
           +++ V+EG+ VQ  + L+ L+D   R+++    Q   +L +   +L A  S      +F 
Sbjct: 97  REVYVKEGQYVQANELLLKLEDANARANYEAVRQHYLSLRSVEGRLLAEQSGAT-KISFH 155

Query: 161 EKNWANSVQLDYSKLAFPPVLSD---SQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQK 217
           E         D  K A  P++     +Q  L++ +R  Y  +   +R       + I+ +
Sbjct: 156 E---------DILKYADDPLVRQQMATQEQLLQSRRLAYEAEQQAMR-------EAIRGQ 199

Query: 218 QQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTE 277
           +  +      I + R      +KEL     L  +G + +   L+L+R   +    L    
Sbjct: 200 EAQVTGYGGMIESRRNQLRLLEKELKSISDLVKQGFMARTRQLELERNAAEVSSILADLN 259

Query: 278 LKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVS 337
             +   +  + E  +  I   Q++R E    L   Q  +    +    + +++  T + S
Sbjct: 260 GNLIKSRQGIAEVKMRLIQRQQEYRKEVDTLLADVQRDVQVDEDKLRAVTEELEHTEIRS 319

Query: 338 PVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSA 397
           PV G V  L   TVGGV+Q    +++IVP ++ LL+EA++ P  I  ++  LP  V+F+ 
Sbjct: 320 PVAGQVVGLVTQTVGGVVQAAQRLMDIVPVDEPLLLEAKVPPHLIDRIKVGLPTDVRFTT 379

Query: 398 YDFTRYGGLEGTLEHISADTTQDEEGN-----SFYLVRVRTKETTLGHDQNLPIIPGMTA 452
           +  +    +EGT++ ISAD   + + +     S+YLVR+      +    N  + PGM A
Sbjct: 380 FAHSPQLLVEGTIQSISADLITENQPSSGQPTSYYLVRISISPEGMKKLGNRNLQPGMAA 439

Query: 453 SVDIITGKRTVLDYLLKPILSAQSNALRE 481
            V I TG+R+VL YLL P+    + +++E
Sbjct: 440 EVVIKTGERSVLTYLLHPLTKRIAASMKE 468