Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Pantoea sp. MT58

 Score =  253 bits (645), Expect = 1e-71
 Identities = 162/433 (37%), Positives = 239/433 (55%), Gaps = 68/433 (15%)

Query: 53  ILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQ 112
           I+W+  A   + + WA +A +D+VTVG GKV PSS+ QVI +L+GG+VKQ+ V EG+ V+
Sbjct: 20  IIWLCTAALAIFLIWAHFAILDEVTVGTGKVTPSSRAQVIDSLDGGIVKQLNVHEGDIVE 79

Query: 113 KGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDY 172
           KGQ L  LD TRF+S+F E + +V  L AS  +L A +S   +  + E            
Sbjct: 80  KGQVLATLDPTRFQSNFGEAQAKVRTLRASSERLEAELSGTPLKFSAETLK--------- 130

Query: 173 SKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARIINLR 232
                       +P+LV R+R  Y     NL   +S                     NL+
Sbjct: 131 ------------EPNLVTRERQLYESRRRNLTETIS---------------------NLQ 157

Query: 233 QSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVREAML 292
           QS    + EL +TEPL  +G   ++E+++L+RQ++D R ++              R   L
Sbjct: 158 QSLKLVQDELRLTEPLVAKGAAGQVEVIRLRRQVSDLRGKIDEA-----------RNDYL 206

Query: 293 SRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVG 352
            R +       E+Q K N    +L +  + A G ED++ R  + SPV G VK + V TVG
Sbjct: 207 VRAH-------EEQVKNNA---ELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTTVG 256

Query: 353 GVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEH 412
           GV++PG  ++EIVP ED LL+E +I P+DI ++RP L A VK +AYD + YG L G +E 
Sbjct: 257 GVLEPGGKLMEIVPLEDQLLIETRINPRDIAWIRPGLAATVKVTAYDSSIYGDLHGEVET 316

Query: 413 ISADTTQDE--EGNSFYLVRVRTKETTLGH--DQNLPIIPGMTASVDIITGKRTVLDYLL 468
           +S DT QDE      +Y V VRT++  L +   +  PI+PGM A+V+I TG+++V+DYL+
Sbjct: 317 VSPDTLQDEVKRDQYYYRVYVRTQKAELTNRAGRKFPIVPGMVANVEIKTGQKSVMDYLI 376

Query: 469 KPILSAQSNALRE 481
           KP L+    +LRE
Sbjct: 377 KP-LNKVKESLRE 388